Gene : Carub.0004s1913 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1913
Name:  ? Carub.0004s1913 Secondary Identifier:  ? PAC:39238347
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1913 0.5kb upstream 0.5kb upstream 3090 true scaffold_4: 10656351-10659440 Capsella rubella
Carub.0004s1913 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10658941-10659440 Capsella rubella
Carub.0004s1913 0.5kb downstream 0.5kb downstream 3090 true scaffold_4: 10655851-10658940 Capsella rubella
Carub.0004s1913 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10655851-10656350 Capsella rubella
Carub.0004s1913 1.0kb upstream 1.0kb upstream 3590 true scaffold_4: 10656351-10659940 Capsella rubella
Carub.0004s1913 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10658941-10659940 Capsella rubella
Carub.0004s1913 1.0kb downstream 1.0kb downstream 3590 true scaffold_4: 10655351-10658940 Capsella rubella
Carub.0004s1913 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10655351-10656350 Capsella rubella
Carub.0004s1913 2.0kb upstream 2.0kb upstream 4590 true scaffold_4: 10656351-10660940 Capsella rubella
Carub.0004s1913 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10658941-10660940 Capsella rubella
Carub.0004s1913 2.0kb downstream 2.0kb downstream 4590 true scaffold_4: 10654351-10658940 Capsella rubella
Carub.0004s1913 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10654351-10656350 Capsella rubella
Carub.0004s1913 5.0kb upstream 5.0kb upstream 7590 true scaffold_4: 10656351-10663940 Capsella rubella
Carub.0004s1913 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10658941-10663940 Capsella rubella
Carub.0004s1913 5.0kb downstream 5.0kb downstream 7590 true scaffold_4: 10651351-10658940 Capsella rubella
Carub.0004s1913 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10651351-10656350 Capsella rubella
Carub.0004s1913 10.0kb upstream 10.0kb upstream 12590 true scaffold_4: 10656351-10668940 Capsella rubella
Carub.0004s1913 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10658941-10668940 Capsella rubella
Carub.0004s1913 10.0kb downstream 10.0kb downstream 12590 true scaffold_4: 10646351-10658940 Capsella rubella
Carub.0004s1913 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10646351-10656350 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366334 5261 Brassicaceae View MSA
123829407 5264 Brassicales-Malvales View MSA
124336947 5266 SBM View MSA
124237102 5268 Malvidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain