Gene : Carub.0004s1943 C. rubella v1.1
Defline:  (1 of 247) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1943
Name:  ? Carub.0004s1943 Secondary Identifier:  ? PAC:39236327
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s1943 0.5kb upstream 0.5kb upstream 1768 true scaffold_4: 10775552-10777319 Capsella rubella
Carub.0004s1943 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10776820-10777319 Capsella rubella
Carub.0004s1943 0.5kb downstream 0.5kb downstream 1768 true scaffold_4: 10775052-10776819 Capsella rubella
Carub.0004s1943 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10775052-10775551 Capsella rubella
Carub.0004s1943 1.0kb upstream 1.0kb upstream 2268 true scaffold_4: 10775552-10777819 Capsella rubella
Carub.0004s1943 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10776820-10777819 Capsella rubella
Carub.0004s1943 1.0kb downstream 1.0kb downstream 2268 true scaffold_4: 10774552-10776819 Capsella rubella
Carub.0004s1943 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10774552-10775551 Capsella rubella
Carub.0004s1943 2.0kb upstream 2.0kb upstream 3268 true scaffold_4: 10775552-10778819 Capsella rubella
Carub.0004s1943 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10776820-10778819 Capsella rubella
Carub.0004s1943 2.0kb downstream 2.0kb downstream 3268 true scaffold_4: 10773552-10776819 Capsella rubella
Carub.0004s1943 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10773552-10775551 Capsella rubella
Carub.0004s1943 5.0kb upstream 5.0kb upstream 6268 true scaffold_4: 10775552-10781819 Capsella rubella
Carub.0004s1943 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10776820-10781819 Capsella rubella
Carub.0004s1943 5.0kb downstream 5.0kb downstream 6268 true scaffold_4: 10770552-10776819 Capsella rubella
Carub.0004s1943 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10770552-10775551 Capsella rubella
Carub.0004s1943 10.0kb upstream 10.0kb upstream 11268 true scaffold_4: 10775552-10786819 Capsella rubella
Carub.0004s1943 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10776820-10786819 Capsella rubella
Carub.0004s1943 10.0kb downstream 10.0kb downstream 11268 true scaffold_4: 10765552-10776819 Capsella rubella
Carub.0004s1943 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10765552-10775551 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364134 5261 Brassicaceae View MSA
123835858 5264 Brassicales-Malvales View MSA
124337003 5266 SBM View MSA
124244201 5268 Malvidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain