Protein : Carub.0004s2255.1.p C. rubella v1.1
UniProt Accession:  ? R0HX52 Secondary Identifier:  PAC:39237684
Organism Name:  Capsella rubella Length:  404  
Name:  Carub.0004s2255.1.p
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Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

4 Protein Domains

DB identifier Type Name
IPR012334 Domain Pectin lyase fold
IPR011050 Domain Pectin lyase fold/virulence factor
IPR006626 Repeat Parallel beta-helix repeat
IPR000743 Family Glycoside hydrolase, family 28
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0004s2255.1_CDS 1215   scaffold_4: 11984902-11986617 Capsella rubella

18 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR000743 InterPro Carub.0004s2255.1.p
GO:0005975 GO Carub.0004s2255.1.p
IPR011050 InterPro Carub.0004s2255.1.p
IPR006626 InterPro Carub.0004s2255.1.p
GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN MetaCyc Carub.0004s2255.1.p
IPR012334 InterPro Carub.0004s2255.1.p
PTHR31375 PANTHER Carub.0004s2255.1.p
RXN-2103 MetaCyc Carub.0004s2255.1.p
3.2.1.67 ENZYME Carub.0004s2255.1.p
3.2.1.15 ENZYME Carub.0004s2255.1.p
GO:0004650 GO Carub.0004s2255.1.p
G3DSA:2.160.20.10 GENE3D Carub.0004s2255.1.p
PWY-1081 Pathway Carub.0004s2255.1.p
PTHR31375:SF10 PANTHER Carub.0004s2255.1.p
SM00710 SMART Carub.0004s2255.1.p
PF00295 PFAM Carub.0004s2255.1.p
SSF51126 SSF Carub.0004s2255.1.p
R0HX52 UniProt Carub.0004s2255.1.p

1 Pathway Components

Type Key Level Step
      7

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic