Gene : Carub.0004s2242 C. rubella v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2242
Name:  ? Carub.0004s2242 Secondary Identifier:  ? PAC:39237917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2242 0.5kb upstream 0.5kb upstream 1424 true scaffold_4: 11936881-11938304 Capsella rubella
Carub.0004s2242 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11936881-11937380 Capsella rubella
Carub.0004s2242 0.5kb downstream 0.5kb downstream 1424 true scaffold_4: 11937381-11938804 Capsella rubella
Carub.0004s2242 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11938305-11938804 Capsella rubella
Carub.0004s2242 1.0kb upstream 1.0kb upstream 1924 true scaffold_4: 11936381-11938304 Capsella rubella
Carub.0004s2242 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11936381-11937380 Capsella rubella
Carub.0004s2242 1.0kb downstream 1.0kb downstream 1924 true scaffold_4: 11937381-11939304 Capsella rubella
Carub.0004s2242 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11938305-11939304 Capsella rubella
Carub.0004s2242 2.0kb upstream 2.0kb upstream 2924 true scaffold_4: 11935381-11938304 Capsella rubella
Carub.0004s2242 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11935381-11937380 Capsella rubella
Carub.0004s2242 2.0kb downstream 2.0kb downstream 2924 true scaffold_4: 11937381-11940304 Capsella rubella
Carub.0004s2242 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11938305-11940304 Capsella rubella
Carub.0004s2242 5.0kb upstream 5.0kb upstream 5924 true scaffold_4: 11932381-11938304 Capsella rubella
Carub.0004s2242 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11932381-11937380 Capsella rubella
Carub.0004s2242 5.0kb downstream 5.0kb downstream 5924 true scaffold_4: 11937381-11943304 Capsella rubella
Carub.0004s2242 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11938305-11943304 Capsella rubella
Carub.0004s2242 10.0kb upstream 10.0kb upstream 10924 true scaffold_4: 11927381-11938304 Capsella rubella
Carub.0004s2242 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11927381-11937380 Capsella rubella
Carub.0004s2242 10.0kb downstream 10.0kb downstream 10924 true scaffold_4: 11937381-11948304 Capsella rubella
Carub.0004s2242 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11938305-11948304 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368425 5261 Brassicaceae View MSA
123834084 5264 Brassicales-Malvales View MSA
124344900 5266 SBM View MSA
124250882 5268 Malvidae View MSA
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain