Gene : Carub.0004s2137 C. rubella v1.1
Defline:  (1 of 5) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2137
Name:  ? Carub.0004s2137 Secondary Identifier:  ? PAC:39239027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2137 0.5kb upstream 0.5kb upstream 1348 true scaffold_4: 11516398-11517745 Capsella rubella
Carub.0004s2137 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11517246-11517745 Capsella rubella
Carub.0004s2137 0.5kb downstream 0.5kb downstream 1348 true scaffold_4: 11515898-11517245 Capsella rubella
Carub.0004s2137 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11515898-11516397 Capsella rubella
Carub.0004s2137 1.0kb upstream 1.0kb upstream 1848 true scaffold_4: 11516398-11518245 Capsella rubella
Carub.0004s2137 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11517246-11518245 Capsella rubella
Carub.0004s2137 1.0kb downstream 1.0kb downstream 1848 true scaffold_4: 11515398-11517245 Capsella rubella
Carub.0004s2137 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11515398-11516397 Capsella rubella
Carub.0004s2137 2.0kb upstream 2.0kb upstream 2848 true scaffold_4: 11516398-11519245 Capsella rubella
Carub.0004s2137 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11517246-11519245 Capsella rubella
Carub.0004s2137 2.0kb downstream 2.0kb downstream 2848 true scaffold_4: 11514398-11517245 Capsella rubella
Carub.0004s2137 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11514398-11516397 Capsella rubella
Carub.0004s2137 5.0kb upstream 5.0kb upstream 5848 true scaffold_4: 11516398-11522245 Capsella rubella
Carub.0004s2137 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11517246-11522245 Capsella rubella
Carub.0004s2137 5.0kb downstream 5.0kb downstream 5848 true scaffold_4: 11511398-11517245 Capsella rubella
Carub.0004s2137 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11511398-11516397 Capsella rubella
Carub.0004s2137 10.0kb upstream 10.0kb upstream 10848 true scaffold_4: 11516398-11527245 Capsella rubella
Carub.0004s2137 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11517246-11527245 Capsella rubella
Carub.0004s2137 10.0kb downstream 10.0kb downstream 10848 true scaffold_4: 11506398-11517245 Capsella rubella
Carub.0004s2137 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11506398-11516397 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511359 5273 Angiosperm View MSA
122375591 5261 Brassicaceae View MSA
123800999 5264 Brassicales-Malvales View MSA
124298346 5266 SBM View MSA
124150008 5268 Malvidae View MSA
123875708 5270 Rosid View MSA
123459489 5271 Pentapetalae View MSA
122494879 5272 Eudicot View MSA
120784407 5274 Embryophyte View MSA
122826323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain