Gene : Carub.0004s2152 C. rubella v1.1
Defline:  (1 of 2) PTHR11562//PTHR11562:SF33 - CATION EFFLUX PROTEIN/ ZINC TRANSPORTER // METAL TOLERANCE PROTEIN 11 Genomic Order:  2152
Name:  ? Carub.0004s2152 Secondary Identifier:  ? PAC:39236850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2152 0.5kb upstream 0.5kb upstream 2882 true scaffold_4: 11565420-11568301 Capsella rubella
Carub.0004s2152 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 11567802-11568301 Capsella rubella
Carub.0004s2152 0.5kb downstream 0.5kb downstream 2882 true scaffold_4: 11564920-11567801 Capsella rubella
Carub.0004s2152 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 11564920-11565419 Capsella rubella
Carub.0004s2152 1.0kb upstream 1.0kb upstream 3382 true scaffold_4: 11565420-11568801 Capsella rubella
Carub.0004s2152 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 11567802-11568801 Capsella rubella
Carub.0004s2152 1.0kb downstream 1.0kb downstream 3382 true scaffold_4: 11564420-11567801 Capsella rubella
Carub.0004s2152 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 11564420-11565419 Capsella rubella
Carub.0004s2152 2.0kb upstream 2.0kb upstream 4382 true scaffold_4: 11565420-11569801 Capsella rubella
Carub.0004s2152 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 11567802-11569801 Capsella rubella
Carub.0004s2152 2.0kb downstream 2.0kb downstream 4382 true scaffold_4: 11563420-11567801 Capsella rubella
Carub.0004s2152 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 11563420-11565419 Capsella rubella
Carub.0004s2152 5.0kb upstream 5.0kb upstream 7382 true scaffold_4: 11565420-11572801 Capsella rubella
Carub.0004s2152 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 11567802-11572801 Capsella rubella
Carub.0004s2152 5.0kb downstream 5.0kb downstream 7382 true scaffold_4: 11560420-11567801 Capsella rubella
Carub.0004s2152 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 11560420-11565419 Capsella rubella
Carub.0004s2152 10.0kb upstream 10.0kb upstream 12382 true scaffold_4: 11565420-11577801 Capsella rubella
Carub.0004s2152 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 11567802-11577801 Capsella rubella
Carub.0004s2152 10.0kb downstream 10.0kb downstream 12382 true scaffold_4: 11555420-11567801 Capsella rubella
Carub.0004s2152 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 11555420-11565419 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360928 5261 Brassicaceae View MSA
123831824 5264 Brassicales-Malvales View MSA
124338273 5266 SBM View MSA
124238342 5268 Malvidae View MSA
124064943 5270 Rosid View MSA
123746602 5271 Pentapetalae View MSA
122792953 5272 Eudicot View MSA
122045121 5273 Angiosperm View MSA
121345008 5274 Embryophyte View MSA
123428793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain