Gene : Carub.0004s2527 C. rubella v1.1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  2527
Name:  ? Carub.0004s2527 Secondary Identifier:  ? PAC:39237641
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2527 0.5kb upstream 0.5kb upstream 4072 true scaffold_4: 12994719-12998790 Capsella rubella
Carub.0004s2527 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12994719-12995218 Capsella rubella
Carub.0004s2527 0.5kb downstream 0.5kb downstream 4072 true scaffold_4: 12995219-12999290 Capsella rubella
Carub.0004s2527 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12998791-12999290 Capsella rubella
Carub.0004s2527 1.0kb upstream 1.0kb upstream 4572 true scaffold_4: 12994219-12998790 Capsella rubella
Carub.0004s2527 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12994219-12995218 Capsella rubella
Carub.0004s2527 1.0kb downstream 1.0kb downstream 4572 true scaffold_4: 12995219-12999790 Capsella rubella
Carub.0004s2527 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12998791-12999790 Capsella rubella
Carub.0004s2527 2.0kb upstream 2.0kb upstream 5572 true scaffold_4: 12993219-12998790 Capsella rubella
Carub.0004s2527 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12993219-12995218 Capsella rubella
Carub.0004s2527 2.0kb downstream 2.0kb downstream 5572 true scaffold_4: 12995219-13000790 Capsella rubella
Carub.0004s2527 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12998791-13000790 Capsella rubella
Carub.0004s2527 5.0kb upstream 5.0kb upstream 8572 true scaffold_4: 12990219-12998790 Capsella rubella
Carub.0004s2527 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12990219-12995218 Capsella rubella
Carub.0004s2527 5.0kb downstream 5.0kb downstream 8572 true scaffold_4: 12995219-13003790 Capsella rubella
Carub.0004s2527 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12998791-13003790 Capsella rubella
Carub.0004s2527 10.0kb upstream 10.0kb upstream 13572 true scaffold_4: 12985219-12998790 Capsella rubella
Carub.0004s2527 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12985219-12995218 Capsella rubella
Carub.0004s2527 10.0kb downstream 10.0kb downstream 13572 true scaffold_4: 12995219-13008790 Capsella rubella
Carub.0004s2527 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12998791-13008790 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367248 5261 Brassicaceae View MSA
123838020 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain