Protein : Carub.0004s2553.1.p C. rubella v1.1
Secondary Identifier:  PAC:39236172 Organism Name:  Capsella rubella
Length:  502   Name:  Carub.0004s2553.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

4 Protein Domains

DB identifier Type Name
IPR000070 Domain Pectinesterase, catalytic
IPR012334 Domain Pectin lyase fold
IPR011050 Domain Pectin lyase fold/virulence factor
IPR006501 Domain Pectinesterase inhibitor domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0004s2553.1_CDS 1509   scaffold_4: 13086416-13088073 Capsella rubella

20 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0005618 GO Carub.0004s2553.1.p
GO:0004857 GO Carub.0004s2553.1.p
GO:0042545 GO Carub.0004s2553.1.p
GO:0030599 GO Carub.0004s2553.1.p
IPR006501 InterPro Carub.0004s2553.1.p
IPR000070 InterPro Carub.0004s2553.1.p
IPR012334 InterPro Carub.0004s2553.1.p
IPR011050 InterPro Carub.0004s2553.1.p
3.1.1.11 ENZYME Carub.0004s2553.1.p
G3DSA:2.160.20.10 GENE3D Carub.0004s2553.1.p
G3DSA:1.20.140.40 GENE3D Carub.0004s2553.1.p
SSF51126 SSF Carub.0004s2553.1.p
PTHR31707 PANTHER Carub.0004s2553.1.p
PECTINESTERASE-RXN MetaCyc Carub.0004s2553.1.p
PWY-1081 Pathway Carub.0004s2553.1.p
PTHR31707:SF29 PANTHER Carub.0004s2553.1.p
PF04043 PFAM Carub.0004s2553.1.p
PF01095 PFAM Carub.0004s2553.1.p
SSF101148 SSF Carub.0004s2553.1.p
SM00856 SMART Carub.0004s2553.1.p

1 Pathway Components

Type Key Level Step
      6

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1081 Capsella rubella pathologic