Gene : Carub.0004s2353 C. rubella v1.1
Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  2353
Name:  ? Carub.0004s2353 Secondary Identifier:  ? PAC:39237329
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CITRULBIO-PWY Capsella rubella pathologic  
Crubella GLUTAMINDEG-PWY Capsella rubella pathologic  
Crubella PWY-3282 Capsella rubella pathologic  
Crubella PWY-4341 Capsella rubella pathologic  
Crubella PWY-6549 Capsella rubella pathologic  
Crubella PWY-6964 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2353 0.5kb upstream 0.5kb upstream 11625 true scaffold_4: 12328009-12339633 Capsella rubella
Carub.0004s2353 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12328009-12328508 Capsella rubella
Carub.0004s2353 0.5kb downstream 0.5kb downstream 11625 true scaffold_4: 12328509-12340133 Capsella rubella
Carub.0004s2353 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12339634-12340133 Capsella rubella
Carub.0004s2353 1.0kb upstream 1.0kb upstream 12125 true scaffold_4: 12327509-12339633 Capsella rubella
Carub.0004s2353 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12327509-12328508 Capsella rubella
Carub.0004s2353 1.0kb downstream 1.0kb downstream 12125 true scaffold_4: 12328509-12340633 Capsella rubella
Carub.0004s2353 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12339634-12340633 Capsella rubella
Carub.0004s2353 2.0kb upstream 2.0kb upstream 13125 true scaffold_4: 12326509-12339633 Capsella rubella
Carub.0004s2353 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12326509-12328508 Capsella rubella
Carub.0004s2353 2.0kb downstream 2.0kb downstream 13125 true scaffold_4: 12328509-12341633 Capsella rubella
Carub.0004s2353 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12339634-12341633 Capsella rubella
Carub.0004s2353 5.0kb upstream 5.0kb upstream 16125 true scaffold_4: 12323509-12339633 Capsella rubella
Carub.0004s2353 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12323509-12328508 Capsella rubella
Carub.0004s2353 5.0kb downstream 5.0kb downstream 16125 true scaffold_4: 12328509-12344633 Capsella rubella
Carub.0004s2353 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12339634-12344633 Capsella rubella
Carub.0004s2353 10.0kb upstream 10.0kb upstream 21125 true scaffold_4: 12318509-12339633 Capsella rubella
Carub.0004s2353 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12318509-12328508 Capsella rubella
Carub.0004s2353 10.0kb downstream 10.0kb downstream 21125 true scaffold_4: 12328509-12349633 Capsella rubella
Carub.0004s2353 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12339634-12349633 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511077 5273 Angiosperm View MSA
122371936 5261 Brassicaceae View MSA
123800262 5264 Brassicales-Malvales View MSA
124297698 5266 SBM View MSA
124149522 5268 Malvidae View MSA
123875316 5270 Rosid View MSA
123459159 5271 Pentapetalae View MSA
122494554 5272 Eudicot View MSA
120784144 5274 Embryophyte View MSA
122826079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain