Gene : Carub.0004s2341 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2341
Name:  ? Carub.0004s2341 Secondary Identifier:  ? PAC:39238022
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2341 0.5kb upstream 0.5kb upstream 3555 true scaffold_4: 12282786-12286340 Capsella rubella
Carub.0004s2341 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12282786-12283285 Capsella rubella
Carub.0004s2341 0.5kb downstream 0.5kb downstream 3555 true scaffold_4: 12283286-12286840 Capsella rubella
Carub.0004s2341 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12286341-12286840 Capsella rubella
Carub.0004s2341 1.0kb upstream 1.0kb upstream 4055 true scaffold_4: 12282286-12286340 Capsella rubella
Carub.0004s2341 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12282286-12283285 Capsella rubella
Carub.0004s2341 1.0kb downstream 1.0kb downstream 4055 true scaffold_4: 12283286-12287340 Capsella rubella
Carub.0004s2341 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12286341-12287340 Capsella rubella
Carub.0004s2341 2.0kb upstream 2.0kb upstream 5055 true scaffold_4: 12281286-12286340 Capsella rubella
Carub.0004s2341 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12281286-12283285 Capsella rubella
Carub.0004s2341 2.0kb downstream 2.0kb downstream 5055 true scaffold_4: 12283286-12288340 Capsella rubella
Carub.0004s2341 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12286341-12288340 Capsella rubella
Carub.0004s2341 5.0kb upstream 5.0kb upstream 8055 true scaffold_4: 12278286-12286340 Capsella rubella
Carub.0004s2341 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12278286-12283285 Capsella rubella
Carub.0004s2341 5.0kb downstream 5.0kb downstream 8055 true scaffold_4: 12283286-12291340 Capsella rubella
Carub.0004s2341 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12286341-12291340 Capsella rubella
Carub.0004s2341 10.0kb upstream 10.0kb upstream 13055 true scaffold_4: 12273286-12286340 Capsella rubella
Carub.0004s2341 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12273286-12283285 Capsella rubella
Carub.0004s2341 10.0kb downstream 10.0kb downstream 13055 true scaffold_4: 12283286-12296340 Capsella rubella
Carub.0004s2341 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12286341-12296340 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026268 5273 Angiosperm View MSA
122371837 5261 Brassicaceae View MSA
123832566 5264 Brassicales-Malvales View MSA
124346075 5266 SBM View MSA
124238842 5268 Malvidae View MSA
124063254 5270 Rosid View MSA
123739998 5271 Pentapetalae View MSA
122787628 5272 Eudicot View MSA
121296253 5274 Embryophyte View MSA
123334450 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain