Protein Family : pentatricopeptide, putative, expressed 123334450

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  60

60 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.195690 (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. sativus v1.0 1926   scaffold01352: 57978-59903
AT2G41080 (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. thaliana TAIR10 1741   Chr2: 17132853-17134593
Thhalv10017967m.g (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) E. salsugineum v1.0 1953   scaffold_10: 11064024-11065976
Ciclev10018004m.g (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. clementina v1.0 1974   scaffold_2: 11416285-11418258
Ciclev10017576m.g (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. clementina v1.0 3333   scaffold_2: 11407538-11410870
Lus10022629.g (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) L. usitatissimum v1.0 1986   scaffold59: 235575-237560
Lus10003324.g (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) L. usitatissimum v1.0 1767   scaffold1120: 20379-22145
Gorai.007G149300 (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) G. raimondii v2.1 2231   Chr07: 12641284-12643514
Thecc1EG008939 (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) T. cacao v1.1 2739   scaffold_2: 18340013-18342751
Migut.M00238 (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. guttatus v2.0 2103   scaffold_13: 4117756-4119858
Araha.12776s0005 (1 of 50) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. halleri v1.1 1953   Scaffold12776: 11705-13657
Cagra.1642s0074 (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. grandiflora v1.1 2577   Scaffold1642: 257761-260337
Glyma.08G086500 (1 of 113) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) G. max Wm82.a2.v1 2025   Chr08: 6545780-6547804
Brara.E00200 (1 of 12) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) B. rapa FPsc v1.3 2269   A05: 1128183-1130451
Bostr.9345s0023 (1 of 57) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) B. stricta v1.2 2017   Scaffold9345: 142540-144556
Medtr4g094658 (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. truncatula Mt4.0v1 2669   chr4: 38660628-38663296
Medtr4g094645 (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. truncatula Mt4.0v1 3032   chr4: 38632937-38635968
SapurV1A.0974s0090 (1 of 83) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) S. purpurea v1.0 2097   chr16: 5502866-5504962
evm_27.TU.AmTr_v1.0_scaffold00050.48 (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. trichopoda v1.0 1126   AmTr_v1.0_scaffold00050: 3186386-3187511
Traes_3AL_710D3F8021 (1 of 127) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) T. aestivum v2.2 2372   ta_iwgsc_3al_v1_4235434: 966-3337
Traes_3B_EBAA32F3B (1 of 127) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) T. aestivum v2.2 2852   ta_iwgsc_3b_v1_10495803: 4-2855
Eucgr.A01932 (1 of 78) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) E. grandis v2.0 1626   Chr01: 34630154-34631779
Prupe.3G112800 (1 of 95) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) P. persica v2.1 2431   Pp03: 9417216-9419646
GSMUA_Achr10G22470_001 (1 of 1) PF00249//PF01535//PF13041//PF14432 - Myb-like DNA-binding domain (Myb_DNA-binding) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. acuminata v1 5464   chr10: 27657781-27663244
Manes.06G077300 (1 of 78) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. esculenta v6.1 2441   Chromosome06: 19160706-19163146
Kalax.0030s0106 (1 of 153) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) K. laxiflora v1.1 2359   scaffold_30: 1000393-1002751
Seita.5G385400 (1 of 47) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) S. italica v2.2 4136   scaffold_5: 41724563-41728698
Bradi2g55230 (1 of 46) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) B. distachyon v3.1 3154   Bd2: 53686006-53689159
Aco015384 (1 of 15) PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. comosus v3 1917   LG23: 169393-171309
Aqcoe1G217700 (1 of 113) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. coerulea v3.1 5300   Chr_01: 13091747-13097046

60 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.195690.1 C. sativus v1.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
AT2G41080.1 A. thaliana TAIR10 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Thhalv10017967m E. salsugineum v1.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Ciclev10018004m C. clementina v1.0 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Ciclev10017576m C. clementina v1.0 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Lus10003324 L. usitatissimum v1.0 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Lus10022629 L. usitatissimum v1.0 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Gorai.007G149300.1 G. raimondii v2.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Thecc1EG008939t1 T. cacao v1.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Migut.M00238.1.p M. guttatus v2.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Araha.12776s0005.1.p A. halleri v1.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Cagra.1642s0074.1.p C. grandiflora v1.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Glyma.08G086500.1.p G. max Wm82.a2.v1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Brara.E00200.1.p B. rapa FPsc v1.3 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Bostr.9345s0023.1.p B. stricta v1.2 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Medtr4g094645.1 M. truncatula Mt4.0v1 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Medtr4g094658.1 M. truncatula Mt4.0v1 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
SapurV1A.0974s0090.1.p S. purpurea v1.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00050.48 A. trichopoda v1.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Traes_3B_EBAA32F3B.3 T. aestivum v2.2 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Traes_3AL_710D3F8021.1 T. aestivum v2.2 123334450 pentatricopeptide, putative, expressed 2 5275 Viridiplantae
Eucgr.A01932.1.p E. grandis v2.0 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Prupe.3G112800.1.p P. persica v2.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
GSMUA_Achr10P22470_001 M. acuminata v1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Manes.06G077300.1.p M. esculenta v6.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Kalax.0030s0106.1.p K. laxiflora v1.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Seita.5G385400.1.p S. italica v2.2 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Bradi2g55230.1.p B. distachyon v3.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Aco015384.1 A. comosus v3 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae
Aqcoe1G217700.1.p A. coerulea v3.1 123334450 pentatricopeptide, putative, expressed 1 5275 Viridiplantae