Gene : evm_27.TU.AmTr_v1.0_scaffold00050.48 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  48
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00050.48 Secondary Identifier:  ? PAC:31571266
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00050.48 0.5kb upstream 0.5kb upstream 1626 true AmTr_v1.0_scaffold00050: 3186386-3188011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00050: 3187512-3188011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 0.5kb downstream 0.5kb downstream 1626 true AmTr_v1.0_scaffold00050: 3185886-3187511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00050: 3185886-3186385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 1.0kb upstream 1.0kb upstream 2126 true AmTr_v1.0_scaffold00050: 3186386-3188511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00050: 3187512-3188511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 1.0kb downstream 1.0kb downstream 2126 true AmTr_v1.0_scaffold00050: 3185386-3187511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00050: 3185386-3186385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 2.0kb upstream 2.0kb upstream 3126 true AmTr_v1.0_scaffold00050: 3186386-3189511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00050: 3187512-3189511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 2.0kb downstream 2.0kb downstream 3126 true AmTr_v1.0_scaffold00050: 3184386-3187511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00050: 3184386-3186385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 5.0kb upstream 5.0kb upstream 6126 true AmTr_v1.0_scaffold00050: 3186386-3192511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00050: 3187512-3192511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 5.0kb downstream 5.0kb downstream 6126 true AmTr_v1.0_scaffold00050: 3181386-3187511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00050: 3181386-3186385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 10.0kb upstream 10.0kb upstream 11126 true AmTr_v1.0_scaffold00050: 3186386-3197511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00050: 3187512-3197511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 10.0kb downstream 10.0kb downstream 11126 true AmTr_v1.0_scaffold00050: 3176386-3187511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.48 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00050: 3176386-3186385 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026268 5273 Angiosperm View MSA
121296253 5274 Embryophyte View MSA
123334450 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain