Gene : Thecc1EG008939 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2105
Name:  ? Thecc1EG008939 Secondary Identifier:  ? PAC:27459753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008939 0.5kb upstream 0.5kb upstream 3239 true scaffold_2: 18339513-18342751 Theobroma cacao
Thecc1EG008939 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 18339513-18340012 Theobroma cacao
Thecc1EG008939 0.5kb downstream 0.5kb downstream 3239 true scaffold_2: 18340013-18343251 Theobroma cacao
Thecc1EG008939 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 18342752-18343251 Theobroma cacao
Thecc1EG008939 1.0kb upstream 1.0kb upstream 3739 true scaffold_2: 18339013-18342751 Theobroma cacao
Thecc1EG008939 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 18339013-18340012 Theobroma cacao
Thecc1EG008939 1.0kb downstream 1.0kb downstream 3739 true scaffold_2: 18340013-18343751 Theobroma cacao
Thecc1EG008939 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 18342752-18343751 Theobroma cacao
Thecc1EG008939 2.0kb upstream 2.0kb upstream 4739 true scaffold_2: 18338013-18342751 Theobroma cacao
Thecc1EG008939 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 18338013-18340012 Theobroma cacao
Thecc1EG008939 2.0kb downstream 2.0kb downstream 4739 true scaffold_2: 18340013-18344751 Theobroma cacao
Thecc1EG008939 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 18342752-18344751 Theobroma cacao
Thecc1EG008939 5.0kb upstream 5.0kb upstream 7739 true scaffold_2: 18335013-18342751 Theobroma cacao
Thecc1EG008939 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 18335013-18340012 Theobroma cacao
Thecc1EG008939 5.0kb downstream 5.0kb downstream 7739 true scaffold_2: 18340013-18347751 Theobroma cacao
Thecc1EG008939 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 18342752-18347751 Theobroma cacao
Thecc1EG008939 10.0kb upstream 10.0kb upstream 12739 true scaffold_2: 18330013-18342751 Theobroma cacao
Thecc1EG008939 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 18330013-18340012 Theobroma cacao
Thecc1EG008939 10.0kb downstream 10.0kb downstream 12739 true scaffold_2: 18340013-18352751 Theobroma cacao
Thecc1EG008939 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 18342752-18352751 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026268 5273 Angiosperm View MSA
123832566 5264 Brassicales-Malvales View MSA
124346075 5266 SBM View MSA
124238842 5268 Malvidae View MSA
124063254 5270 Rosid View MSA
123739998 5271 Pentapetalae View MSA
122787628 5272 Eudicot View MSA
121296253 5274 Embryophyte View MSA
123334450 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain