Gene : Carub.0004s2343 C. rubella v1.1
Defline:  (1 of 1) PF03745 - Domain of unknown function (DUF309) (DUF309) Genomic Order:  2343
Name:  ? Carub.0004s2343 Secondary Identifier:  ? PAC:39237299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2343 0.5kb upstream 0.5kb upstream 1650 true scaffold_4: 12288288-12289937 Capsella rubella
Carub.0004s2343 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12289438-12289937 Capsella rubella
Carub.0004s2343 0.5kb downstream 0.5kb downstream 1650 true scaffold_4: 12287788-12289437 Capsella rubella
Carub.0004s2343 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12287788-12288287 Capsella rubella
Carub.0004s2343 1.0kb upstream 1.0kb upstream 2150 true scaffold_4: 12288288-12290437 Capsella rubella
Carub.0004s2343 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12289438-12290437 Capsella rubella
Carub.0004s2343 1.0kb downstream 1.0kb downstream 2150 true scaffold_4: 12287288-12289437 Capsella rubella
Carub.0004s2343 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12287288-12288287 Capsella rubella
Carub.0004s2343 2.0kb upstream 2.0kb upstream 3150 true scaffold_4: 12288288-12291437 Capsella rubella
Carub.0004s2343 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12289438-12291437 Capsella rubella
Carub.0004s2343 2.0kb downstream 2.0kb downstream 3150 true scaffold_4: 12286288-12289437 Capsella rubella
Carub.0004s2343 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12286288-12288287 Capsella rubella
Carub.0004s2343 5.0kb upstream 5.0kb upstream 6150 true scaffold_4: 12288288-12294437 Capsella rubella
Carub.0004s2343 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12289438-12294437 Capsella rubella
Carub.0004s2343 5.0kb downstream 5.0kb downstream 6150 true scaffold_4: 12283288-12289437 Capsella rubella
Carub.0004s2343 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12283288-12288287 Capsella rubella
Carub.0004s2343 10.0kb upstream 10.0kb upstream 11150 true scaffold_4: 12288288-12299437 Capsella rubella
Carub.0004s2343 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12289438-12299437 Capsella rubella
Carub.0004s2343 10.0kb downstream 10.0kb downstream 11150 true scaffold_4: 12278288-12289437 Capsella rubella
Carub.0004s2343 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12278288-12288287 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362390 5261 Brassicaceae View MSA
123834781 5264 Brassicales-Malvales View MSA
124345015 5266 SBM View MSA
124243142 5268 Malvidae View MSA
124061241 5270 Rosid View MSA
123740961 5271 Pentapetalae View MSA
122788122 5272 Eudicot View MSA
122046140 5273 Angiosperm View MSA
121347682 5274 Embryophyte View MSA
123380599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain