Gene : Carub.0004s2377 C. rubella v1.1
Defline:  (1 of 4) PF06232 - Embryo-specific protein 3, (ATS3) (ATS3) Genomic Order:  2377
Name:  ? Carub.0004s2377 Secondary Identifier:  ? PAC:39238798
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2377 0.5kb upstream 0.5kb upstream 1953 true scaffold_4: 12432591-12434543 Capsella rubella
Carub.0004s2377 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12434044-12434543 Capsella rubella
Carub.0004s2377 0.5kb downstream 0.5kb downstream 1953 true scaffold_4: 12432091-12434043 Capsella rubella
Carub.0004s2377 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12432091-12432590 Capsella rubella
Carub.0004s2377 1.0kb upstream 1.0kb upstream 2453 true scaffold_4: 12432591-12435043 Capsella rubella
Carub.0004s2377 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12434044-12435043 Capsella rubella
Carub.0004s2377 1.0kb downstream 1.0kb downstream 2453 true scaffold_4: 12431591-12434043 Capsella rubella
Carub.0004s2377 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12431591-12432590 Capsella rubella
Carub.0004s2377 2.0kb upstream 2.0kb upstream 3453 true scaffold_4: 12432591-12436043 Capsella rubella
Carub.0004s2377 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12434044-12436043 Capsella rubella
Carub.0004s2377 2.0kb downstream 2.0kb downstream 3453 true scaffold_4: 12430591-12434043 Capsella rubella
Carub.0004s2377 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12430591-12432590 Capsella rubella
Carub.0004s2377 5.0kb upstream 5.0kb upstream 6453 true scaffold_4: 12432591-12439043 Capsella rubella
Carub.0004s2377 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12434044-12439043 Capsella rubella
Carub.0004s2377 5.0kb downstream 5.0kb downstream 6453 true scaffold_4: 12427591-12434043 Capsella rubella
Carub.0004s2377 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12427591-12432590 Capsella rubella
Carub.0004s2377 10.0kb upstream 10.0kb upstream 11453 true scaffold_4: 12432591-12444043 Capsella rubella
Carub.0004s2377 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12434044-12444043 Capsella rubella
Carub.0004s2377 10.0kb downstream 10.0kb downstream 11453 true scaffold_4: 12422591-12434043 Capsella rubella
Carub.0004s2377 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12422591-12432590 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363608 5261 Brassicaceae View MSA
123839417 5264 Brassicales-Malvales View MSA
124347670 5266 SBM View MSA
124251056 5268 Malvidae View MSA
124070203 5270 Rosid View MSA
123746143 5271 Pentapetalae View MSA
122796857 5272 Eudicot View MSA
122048426 5273 Angiosperm View MSA
121310965 5274 Embryophyte View MSA
123348331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain