Gene : Carub.0004s2395 C. rubella v1.1
Defline:  (1 of 1) PTHR22912:SF48 - NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3 Genomic Order:  2395
Name:  ? Carub.0004s2395 Secondary Identifier:  ? PAC:39236197
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2395 0.5kb upstream 0.5kb upstream 3723 true scaffold_4: 12502104-12505826 Capsella rubella
Carub.0004s2395 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12505327-12505826 Capsella rubella
Carub.0004s2395 0.5kb downstream 0.5kb downstream 3723 true scaffold_4: 12501604-12505326 Capsella rubella
Carub.0004s2395 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12501604-12502103 Capsella rubella
Carub.0004s2395 1.0kb upstream 1.0kb upstream 4223 true scaffold_4: 12502104-12506326 Capsella rubella
Carub.0004s2395 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12505327-12506326 Capsella rubella
Carub.0004s2395 1.0kb downstream 1.0kb downstream 4223 true scaffold_4: 12501104-12505326 Capsella rubella
Carub.0004s2395 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12501104-12502103 Capsella rubella
Carub.0004s2395 2.0kb upstream 2.0kb upstream 5223 true scaffold_4: 12502104-12507326 Capsella rubella
Carub.0004s2395 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12505327-12507326 Capsella rubella
Carub.0004s2395 2.0kb downstream 2.0kb downstream 5223 true scaffold_4: 12500104-12505326 Capsella rubella
Carub.0004s2395 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12500104-12502103 Capsella rubella
Carub.0004s2395 5.0kb upstream 5.0kb upstream 8223 true scaffold_4: 12502104-12510326 Capsella rubella
Carub.0004s2395 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12505327-12510326 Capsella rubella
Carub.0004s2395 5.0kb downstream 5.0kb downstream 8223 true scaffold_4: 12497104-12505326 Capsella rubella
Carub.0004s2395 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12497104-12502103 Capsella rubella
Carub.0004s2395 10.0kb upstream 10.0kb upstream 13223 true scaffold_4: 12502104-12515326 Capsella rubella
Carub.0004s2395 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12505327-12515326 Capsella rubella
Carub.0004s2395 10.0kb downstream 10.0kb downstream 13223 true scaffold_4: 12492104-12505326 Capsella rubella
Carub.0004s2395 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12492104-12502103 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375618 5261 Brassicaceae View MSA
123830381 5264 Brassicales-Malvales View MSA
124340337 5266 SBM View MSA
124243162 5268 Malvidae View MSA
124063608 5270 Rosid View MSA
123745502 5271 Pentapetalae View MSA
122789428 5272 Eudicot View MSA
122046832 5273 Angiosperm View MSA
121345870 5274 Embryophyte View MSA
123426423 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain