Gene : Carub.0004s2405 C. rubella v1.1
Defline:  (1 of 2) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  2405
Name:  ? Carub.0004s2405 Secondary Identifier:  ? PAC:39237223
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2405 0.5kb upstream 0.5kb upstream 3568 true scaffold_4: 12548318-12551885 Capsella rubella
Carub.0004s2405 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 12551386-12551885 Capsella rubella
Carub.0004s2405 0.5kb downstream 0.5kb downstream 3568 true scaffold_4: 12547818-12551385 Capsella rubella
Carub.0004s2405 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 12547818-12548317 Capsella rubella
Carub.0004s2405 1.0kb upstream 1.0kb upstream 4068 true scaffold_4: 12548318-12552385 Capsella rubella
Carub.0004s2405 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 12551386-12552385 Capsella rubella
Carub.0004s2405 1.0kb downstream 1.0kb downstream 4068 true scaffold_4: 12547318-12551385 Capsella rubella
Carub.0004s2405 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 12547318-12548317 Capsella rubella
Carub.0004s2405 2.0kb upstream 2.0kb upstream 5068 true scaffold_4: 12548318-12553385 Capsella rubella
Carub.0004s2405 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 12551386-12553385 Capsella rubella
Carub.0004s2405 2.0kb downstream 2.0kb downstream 5068 true scaffold_4: 12546318-12551385 Capsella rubella
Carub.0004s2405 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 12546318-12548317 Capsella rubella
Carub.0004s2405 5.0kb upstream 5.0kb upstream 8068 true scaffold_4: 12548318-12556385 Capsella rubella
Carub.0004s2405 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 12551386-12556385 Capsella rubella
Carub.0004s2405 5.0kb downstream 5.0kb downstream 8068 true scaffold_4: 12543318-12551385 Capsella rubella
Carub.0004s2405 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 12543318-12548317 Capsella rubella
Carub.0004s2405 10.0kb upstream 10.0kb upstream 13068 true scaffold_4: 12548318-12561385 Capsella rubella
Carub.0004s2405 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 12551386-12561385 Capsella rubella
Carub.0004s2405 10.0kb downstream 10.0kb downstream 13068 true scaffold_4: 12538318-12551385 Capsella rubella
Carub.0004s2405 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 12538318-12548317 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360561 5261 Brassicaceae View MSA
123836210 5264 Brassicales-Malvales View MSA
124337642 5266 SBM View MSA
124245745 5268 Malvidae View MSA
124061899 5270 Rosid View MSA
123745860 5271 Pentapetalae View MSA
122790423 5272 Eudicot View MSA
122044910 5273 Angiosperm View MSA
121350104 5274 Embryophyte View MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain