Gene : Carub.0004s2697 C. rubella v1.1
Defline:  (1 of 6) PTHR13871:SF42 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2697
Name:  ? Carub.0004s2697 Secondary Identifier:  ? PAC:39237686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2697 0.5kb upstream 0.5kb upstream 1241 true scaffold_4: 13552494-13553734 Capsella rubella
Carub.0004s2697 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13553235-13553734 Capsella rubella
Carub.0004s2697 0.5kb downstream 0.5kb downstream 1241 true scaffold_4: 13551994-13553234 Capsella rubella
Carub.0004s2697 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13551994-13552493 Capsella rubella
Carub.0004s2697 1.0kb upstream 1.0kb upstream 1741 true scaffold_4: 13552494-13554234 Capsella rubella
Carub.0004s2697 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13553235-13554234 Capsella rubella
Carub.0004s2697 1.0kb downstream 1.0kb downstream 1741 true scaffold_4: 13551494-13553234 Capsella rubella
Carub.0004s2697 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13551494-13552493 Capsella rubella
Carub.0004s2697 2.0kb upstream 2.0kb upstream 2741 true scaffold_4: 13552494-13555234 Capsella rubella
Carub.0004s2697 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13553235-13555234 Capsella rubella
Carub.0004s2697 2.0kb downstream 2.0kb downstream 2741 true scaffold_4: 13550494-13553234 Capsella rubella
Carub.0004s2697 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13550494-13552493 Capsella rubella
Carub.0004s2697 5.0kb upstream 5.0kb upstream 5741 true scaffold_4: 13552494-13558234 Capsella rubella
Carub.0004s2697 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13553235-13558234 Capsella rubella
Carub.0004s2697 5.0kb downstream 5.0kb downstream 5741 true scaffold_4: 13547494-13553234 Capsella rubella
Carub.0004s2697 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13547494-13552493 Capsella rubella
Carub.0004s2697 10.0kb upstream 10.0kb upstream 10741 true scaffold_4: 13552494-13563234 Capsella rubella
Carub.0004s2697 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13553235-13563234 Capsella rubella
Carub.0004s2697 10.0kb downstream 10.0kb downstream 10741 true scaffold_4: 13542494-13553234 Capsella rubella
Carub.0004s2697 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13542494-13552493 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374854 5261 Brassicaceae View MSA
123841586 5264 Brassicales-Malvales View MSA
124322960 5266 SBM View MSA
124254398 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain