Gene : Carub.0004s2689 C. rubella v1.1
Defline:  (1 of 2) PTHR33044//PTHR33044:SF21 - FAMILY NOT NAMED // PROTEIN YLS3 Genomic Order:  2689
Name:  ? Carub.0004s2689 Secondary Identifier:  ? PAC:39235934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2689 0.5kb upstream 0.5kb upstream 1665 true scaffold_4: 13533075-13534739 Capsella rubella
Carub.0004s2689 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13534240-13534739 Capsella rubella
Carub.0004s2689 0.5kb downstream 0.5kb downstream 1665 true scaffold_4: 13532575-13534239 Capsella rubella
Carub.0004s2689 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13532575-13533074 Capsella rubella
Carub.0004s2689 1.0kb upstream 1.0kb upstream 2165 true scaffold_4: 13533075-13535239 Capsella rubella
Carub.0004s2689 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13534240-13535239 Capsella rubella
Carub.0004s2689 1.0kb downstream 1.0kb downstream 2165 true scaffold_4: 13532075-13534239 Capsella rubella
Carub.0004s2689 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13532075-13533074 Capsella rubella
Carub.0004s2689 2.0kb upstream 2.0kb upstream 3165 true scaffold_4: 13533075-13536239 Capsella rubella
Carub.0004s2689 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13534240-13536239 Capsella rubella
Carub.0004s2689 2.0kb downstream 2.0kb downstream 3165 true scaffold_4: 13531075-13534239 Capsella rubella
Carub.0004s2689 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13531075-13533074 Capsella rubella
Carub.0004s2689 5.0kb upstream 5.0kb upstream 6165 true scaffold_4: 13533075-13539239 Capsella rubella
Carub.0004s2689 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13534240-13539239 Capsella rubella
Carub.0004s2689 5.0kb downstream 5.0kb downstream 6165 true scaffold_4: 13528075-13534239 Capsella rubella
Carub.0004s2689 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13528075-13533074 Capsella rubella
Carub.0004s2689 10.0kb upstream 10.0kb upstream 11165 true scaffold_4: 13533075-13544239 Capsella rubella
Carub.0004s2689 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13534240-13544239 Capsella rubella
Carub.0004s2689 10.0kb downstream 10.0kb downstream 11165 true scaffold_4: 13523075-13534239 Capsella rubella
Carub.0004s2689 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13523075-13533074 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361661 5261 Brassicaceae View MSA
123829816 5264 Brassicales-Malvales View MSA
124347583 5266 SBM View MSA
124246606 5268 Malvidae View MSA
124072717 5270 Rosid View MSA
123745802 5271 Pentapetalae View MSA
122796535 5272 Eudicot View MSA
122051286 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain