Gene : Carub.0004s2708 C. rubella v1.1
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  2708
Name:  ? Carub.0004s2708 Secondary Identifier:  ? PAC:39237995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2708 0.5kb upstream 0.5kb upstream 3036 true scaffold_4: 13596145-13599180 Capsella rubella
Carub.0004s2708 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13596145-13596644 Capsella rubella
Carub.0004s2708 0.5kb downstream 0.5kb downstream 3036 true scaffold_4: 13596645-13599680 Capsella rubella
Carub.0004s2708 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13599181-13599680 Capsella rubella
Carub.0004s2708 1.0kb upstream 1.0kb upstream 3536 true scaffold_4: 13595645-13599180 Capsella rubella
Carub.0004s2708 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13595645-13596644 Capsella rubella
Carub.0004s2708 1.0kb downstream 1.0kb downstream 3536 true scaffold_4: 13596645-13600180 Capsella rubella
Carub.0004s2708 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13599181-13600180 Capsella rubella
Carub.0004s2708 2.0kb upstream 2.0kb upstream 4536 true scaffold_4: 13594645-13599180 Capsella rubella
Carub.0004s2708 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13594645-13596644 Capsella rubella
Carub.0004s2708 2.0kb downstream 2.0kb downstream 4536 true scaffold_4: 13596645-13601180 Capsella rubella
Carub.0004s2708 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13599181-13601180 Capsella rubella
Carub.0004s2708 5.0kb upstream 5.0kb upstream 7536 true scaffold_4: 13591645-13599180 Capsella rubella
Carub.0004s2708 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13591645-13596644 Capsella rubella
Carub.0004s2708 5.0kb downstream 5.0kb downstream 7536 true scaffold_4: 13596645-13604180 Capsella rubella
Carub.0004s2708 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13599181-13604180 Capsella rubella
Carub.0004s2708 10.0kb upstream 10.0kb upstream 12536 true scaffold_4: 13586645-13599180 Capsella rubella
Carub.0004s2708 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13586645-13596644 Capsella rubella
Carub.0004s2708 10.0kb downstream 10.0kb downstream 12536 true scaffold_4: 13596645-13609180 Capsella rubella
Carub.0004s2708 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13599181-13609180 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370140 5261 Brassicaceae View MSA
123829478 5264 Brassicales-Malvales View MSA
124344168 5266 SBM View MSA
124238868 5268 Malvidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain