Gene : Carub.0004s2759 C. rubella v1.1
Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase Genomic Order:  2759
Name:  ? Carub.0004s2759 Secondary Identifier:  ? PAC:39237159
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7101 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2759 0.5kb upstream 0.5kb upstream 2896 true scaffold_4: 13786109-13789004 Capsella rubella
Carub.0004s2759 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13786109-13786608 Capsella rubella
Carub.0004s2759 0.5kb downstream 0.5kb downstream 2896 true scaffold_4: 13786609-13789504 Capsella rubella
Carub.0004s2759 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13789005-13789504 Capsella rubella
Carub.0004s2759 1.0kb upstream 1.0kb upstream 3396 true scaffold_4: 13785609-13789004 Capsella rubella
Carub.0004s2759 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13785609-13786608 Capsella rubella
Carub.0004s2759 1.0kb downstream 1.0kb downstream 3396 true scaffold_4: 13786609-13790004 Capsella rubella
Carub.0004s2759 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13789005-13790004 Capsella rubella
Carub.0004s2759 2.0kb upstream 2.0kb upstream 4396 true scaffold_4: 13784609-13789004 Capsella rubella
Carub.0004s2759 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13784609-13786608 Capsella rubella
Carub.0004s2759 2.0kb downstream 2.0kb downstream 4396 true scaffold_4: 13786609-13791004 Capsella rubella
Carub.0004s2759 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13789005-13791004 Capsella rubella
Carub.0004s2759 5.0kb upstream 5.0kb upstream 7396 true scaffold_4: 13781609-13789004 Capsella rubella
Carub.0004s2759 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13781609-13786608 Capsella rubella
Carub.0004s2759 5.0kb downstream 5.0kb downstream 7396 true scaffold_4: 13786609-13794004 Capsella rubella
Carub.0004s2759 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13789005-13794004 Capsella rubella
Carub.0004s2759 10.0kb upstream 10.0kb upstream 12396 true scaffold_4: 13776609-13789004 Capsella rubella
Carub.0004s2759 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13776609-13786608 Capsella rubella
Carub.0004s2759 10.0kb downstream 10.0kb downstream 12396 true scaffold_4: 13786609-13799004 Capsella rubella
Carub.0004s2759 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13789005-13799004 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364004 5261 Brassicaceae View MSA
123829529 5264 Brassicales-Malvales View MSA
124346337 5266 SBM View MSA
124240991 5268 Malvidae View MSA
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain