Gene : Carub.0004s2781 C. rubella v1.1
Defline:  (1 of 2) PTHR31675//PTHR31675:SF0 - FAMILY NOT NAMED // AXIAL REGULATOR YABBY 1-RELATED Genomic Order:  2781
Name:  ? Carub.0004s2781 Secondary Identifier:  ? PAC:39238017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2781 0.5kb upstream 0.5kb upstream 2921 true scaffold_4: 13855800-13858720 Capsella rubella
Carub.0004s2781 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13858221-13858720 Capsella rubella
Carub.0004s2781 0.5kb downstream 0.5kb downstream 2921 true scaffold_4: 13855300-13858220 Capsella rubella
Carub.0004s2781 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13855300-13855799 Capsella rubella
Carub.0004s2781 1.0kb upstream 1.0kb upstream 3421 true scaffold_4: 13855800-13859220 Capsella rubella
Carub.0004s2781 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13858221-13859220 Capsella rubella
Carub.0004s2781 1.0kb downstream 1.0kb downstream 3421 true scaffold_4: 13854800-13858220 Capsella rubella
Carub.0004s2781 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13854800-13855799 Capsella rubella
Carub.0004s2781 2.0kb upstream 2.0kb upstream 4421 true scaffold_4: 13855800-13860220 Capsella rubella
Carub.0004s2781 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13858221-13860220 Capsella rubella
Carub.0004s2781 2.0kb downstream 2.0kb downstream 4421 true scaffold_4: 13853800-13858220 Capsella rubella
Carub.0004s2781 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13853800-13855799 Capsella rubella
Carub.0004s2781 5.0kb upstream 5.0kb upstream 7421 true scaffold_4: 13855800-13863220 Capsella rubella
Carub.0004s2781 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13858221-13863220 Capsella rubella
Carub.0004s2781 5.0kb downstream 5.0kb downstream 7421 true scaffold_4: 13850800-13858220 Capsella rubella
Carub.0004s2781 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13850800-13855799 Capsella rubella
Carub.0004s2781 10.0kb upstream 10.0kb upstream 12421 true scaffold_4: 13855800-13868220 Capsella rubella
Carub.0004s2781 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13858221-13868220 Capsella rubella
Carub.0004s2781 10.0kb downstream 10.0kb downstream 12421 true scaffold_4: 13845800-13858220 Capsella rubella
Carub.0004s2781 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13845800-13855799 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367431 5261 Brassicaceae View MSA
123839809 5264 Brassicales-Malvales View MSA
124344068 5266 SBM View MSA
124246217 5268 Malvidae View MSA
124070800 5270 Rosid View MSA
123746841 5271 Pentapetalae View MSA
122797230 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain