Gene : Carub.0004s2614 C. rubella v1.1
Defline:  (1 of 19) 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase Genomic Order:  2614
Name:  ? Carub.0004s2614 Secondary Identifier:  ? PAC:39236149
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6902 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2614 0.5kb upstream 0.5kb upstream 1674 true scaffold_4: 13294587-13296260 Capsella rubella
Carub.0004s2614 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13295761-13296260 Capsella rubella
Carub.0004s2614 0.5kb downstream 0.5kb downstream 1674 true scaffold_4: 13294087-13295760 Capsella rubella
Carub.0004s2614 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13294087-13294586 Capsella rubella
Carub.0004s2614 1.0kb upstream 1.0kb upstream 2174 true scaffold_4: 13294587-13296760 Capsella rubella
Carub.0004s2614 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13295761-13296760 Capsella rubella
Carub.0004s2614 1.0kb downstream 1.0kb downstream 2174 true scaffold_4: 13293587-13295760 Capsella rubella
Carub.0004s2614 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13293587-13294586 Capsella rubella
Carub.0004s2614 2.0kb upstream 2.0kb upstream 3174 true scaffold_4: 13294587-13297760 Capsella rubella
Carub.0004s2614 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13295761-13297760 Capsella rubella
Carub.0004s2614 2.0kb downstream 2.0kb downstream 3174 true scaffold_4: 13292587-13295760 Capsella rubella
Carub.0004s2614 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13292587-13294586 Capsella rubella
Carub.0004s2614 5.0kb upstream 5.0kb upstream 6174 true scaffold_4: 13294587-13300760 Capsella rubella
Carub.0004s2614 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13295761-13300760 Capsella rubella
Carub.0004s2614 5.0kb downstream 5.0kb downstream 6174 true scaffold_4: 13289587-13295760 Capsella rubella
Carub.0004s2614 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13289587-13294586 Capsella rubella
Carub.0004s2614 10.0kb upstream 10.0kb upstream 11174 true scaffold_4: 13294587-13305760 Capsella rubella
Carub.0004s2614 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13295761-13305760 Capsella rubella
Carub.0004s2614 10.0kb downstream 10.0kb downstream 11174 true scaffold_4: 13284587-13295760 Capsella rubella
Carub.0004s2614 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13284587-13294586 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122370727 5261 Brassicaceae View MSA
123800030 5264 Brassicales-Malvales View MSA
124297491 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain