Gene : Carub.0004s2626 C. rubella v1.1

Defline:  (1 of 3) KOG3377 - Uncharacterized conserved protein Genomic Order:  2626
Name:  ? Carub.0004s2626 Secondary Identifier:  ? PAC:39236120

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2626 0.5kb upstream 0.5kb upstream 1666 true scaffold_4: 13329732-13331397 Capsella rubella
Carub.0004s2626 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13329732-13330231 Capsella rubella
Carub.0004s2626 0.5kb downstream 0.5kb downstream 1666 true scaffold_4: 13330232-13331897 Capsella rubella
Carub.0004s2626 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13331398-13331897 Capsella rubella
Carub.0004s2626 1.0kb upstream 1.0kb upstream 2166 true scaffold_4: 13329232-13331397 Capsella rubella
Carub.0004s2626 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13329232-13330231 Capsella rubella
Carub.0004s2626 1.0kb downstream 1.0kb downstream 2166 true scaffold_4: 13330232-13332397 Capsella rubella
Carub.0004s2626 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13331398-13332397 Capsella rubella
Carub.0004s2626 2.0kb upstream 2.0kb upstream 3166 true scaffold_4: 13328232-13331397 Capsella rubella
Carub.0004s2626 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13328232-13330231 Capsella rubella
Carub.0004s2626 2.0kb downstream 2.0kb downstream 3166 true scaffold_4: 13330232-13333397 Capsella rubella
Carub.0004s2626 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13331398-13333397 Capsella rubella
Carub.0004s2626 5.0kb upstream 5.0kb upstream 6166 true scaffold_4: 13325232-13331397 Capsella rubella
Carub.0004s2626 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13325232-13330231 Capsella rubella
Carub.0004s2626 5.0kb downstream 5.0kb downstream 6166 true scaffold_4: 13330232-13336397 Capsella rubella
Carub.0004s2626 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13331398-13336397 Capsella rubella
Carub.0004s2626 10.0kb upstream 10.0kb upstream 11166 true scaffold_4: 13320232-13331397 Capsella rubella
Carub.0004s2626 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13320232-13330231 Capsella rubella
Carub.0004s2626 10.0kb downstream 10.0kb downstream 11166 true scaffold_4: 13330232-13341397 Capsella rubella
Carub.0004s2626 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13331398-13341397 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510536 5273 Angiosperm View MSA
122365185 5261 Brassicaceae View MSA
123798910 5264 Brassicales-Malvales View MSA
124296485 5266 SBM View MSA
124148621 5268 Malvidae View MSA
123874581 5270 Rosid View MSA
123458531 5271 Pentapetalae View MSA
122493936 5272 Eudicot View MSA
121351365 5274 Embryophyte View MSA
123425243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain