Gene : Carub.0004s2647 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.9 - Thiol S-methyltransferase Genomic Order:  2647
Name:  ? Carub.0004s2647 Secondary Identifier:  ? PAC:39236779
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6730 Capsella rubella pathologic  
Crubella PWY-6736 Capsella rubella pathologic  
Crubella PWY-6842 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2647 0.5kb upstream 0.5kb upstream 2968 true scaffold_4: 13400030-13402997 Capsella rubella
Carub.0004s2647 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13402498-13402997 Capsella rubella
Carub.0004s2647 0.5kb downstream 0.5kb downstream 2968 true scaffold_4: 13399530-13402497 Capsella rubella
Carub.0004s2647 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13399530-13400029 Capsella rubella
Carub.0004s2647 1.0kb upstream 1.0kb upstream 3468 true scaffold_4: 13400030-13403497 Capsella rubella
Carub.0004s2647 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13402498-13403497 Capsella rubella
Carub.0004s2647 1.0kb downstream 1.0kb downstream 3468 true scaffold_4: 13399030-13402497 Capsella rubella
Carub.0004s2647 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13399030-13400029 Capsella rubella
Carub.0004s2647 2.0kb upstream 2.0kb upstream 4468 true scaffold_4: 13400030-13404497 Capsella rubella
Carub.0004s2647 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13402498-13404497 Capsella rubella
Carub.0004s2647 2.0kb downstream 2.0kb downstream 4468 true scaffold_4: 13398030-13402497 Capsella rubella
Carub.0004s2647 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13398030-13400029 Capsella rubella
Carub.0004s2647 5.0kb upstream 5.0kb upstream 7468 true scaffold_4: 13400030-13407497 Capsella rubella
Carub.0004s2647 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13402498-13407497 Capsella rubella
Carub.0004s2647 5.0kb downstream 5.0kb downstream 7468 true scaffold_4: 13395030-13402497 Capsella rubella
Carub.0004s2647 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13395030-13400029 Capsella rubella
Carub.0004s2647 10.0kb upstream 10.0kb upstream 12468 true scaffold_4: 13400030-13412497 Capsella rubella
Carub.0004s2647 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13402498-13412497 Capsella rubella
Carub.0004s2647 10.0kb downstream 10.0kb downstream 12468 true scaffold_4: 13390030-13402497 Capsella rubella
Carub.0004s2647 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13390030-13400029 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122379294 5261 Brassicaceae View MSA
123802194 5264 Brassicales-Malvales View MSA
124299408 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain