Gene : Carub.0004s2658 C. rubella v1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF8 - CGI-12 PROTEIN-RELATED // EXPRESSED PROTEIN Genomic Order:  2658
Name:  ? Carub.0004s2658 Secondary Identifier:  ? PAC:39238535
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2658 0.5kb upstream 0.5kb upstream 2423 true scaffold_4: 13428537-13430959 Capsella rubella
Carub.0004s2658 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 13430460-13430959 Capsella rubella
Carub.0004s2658 0.5kb downstream 0.5kb downstream 2423 true scaffold_4: 13428037-13430459 Capsella rubella
Carub.0004s2658 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 13428037-13428536 Capsella rubella
Carub.0004s2658 1.0kb upstream 1.0kb upstream 2923 true scaffold_4: 13428537-13431459 Capsella rubella
Carub.0004s2658 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 13430460-13431459 Capsella rubella
Carub.0004s2658 1.0kb downstream 1.0kb downstream 2923 true scaffold_4: 13427537-13430459 Capsella rubella
Carub.0004s2658 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 13427537-13428536 Capsella rubella
Carub.0004s2658 2.0kb upstream 2.0kb upstream 3923 true scaffold_4: 13428537-13432459 Capsella rubella
Carub.0004s2658 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 13430460-13432459 Capsella rubella
Carub.0004s2658 2.0kb downstream 2.0kb downstream 3923 true scaffold_4: 13426537-13430459 Capsella rubella
Carub.0004s2658 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 13426537-13428536 Capsella rubella
Carub.0004s2658 5.0kb upstream 5.0kb upstream 6923 true scaffold_4: 13428537-13435459 Capsella rubella
Carub.0004s2658 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 13430460-13435459 Capsella rubella
Carub.0004s2658 5.0kb downstream 5.0kb downstream 6923 true scaffold_4: 13423537-13430459 Capsella rubella
Carub.0004s2658 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 13423537-13428536 Capsella rubella
Carub.0004s2658 10.0kb upstream 10.0kb upstream 11923 true scaffold_4: 13428537-13440459 Capsella rubella
Carub.0004s2658 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 13430460-13440459 Capsella rubella
Carub.0004s2658 10.0kb downstream 10.0kb downstream 11923 true scaffold_4: 13418537-13430459 Capsella rubella
Carub.0004s2658 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 13418537-13428536 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367459 5261 Brassicaceae View MSA
123830346 5264 Brassicales-Malvales View MSA
124341224 5266 SBM View MSA
124238880 5268 Malvidae View MSA
124066274 5270 Rosid View MSA
123737685 5271 Pentapetalae View MSA
122791060 5272 Eudicot View MSA
122041576 5273 Angiosperm View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain