Gene : Carub.0004s3014 C. rubella v1.1
Defline:  (1 of 3) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase Genomic Order:  3014
Name:  ? Carub.0004s3014 Secondary Identifier:  ? PAC:39236979
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s3014 0.5kb upstream 0.5kb upstream 1799 true scaffold_4: 14796639-14798437 Capsella rubella
Carub.0004s3014 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14796639-14797138 Capsella rubella
Carub.0004s3014 0.5kb downstream 0.5kb downstream 1799 true scaffold_4: 14797139-14798937 Capsella rubella
Carub.0004s3014 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14798438-14798937 Capsella rubella
Carub.0004s3014 1.0kb upstream 1.0kb upstream 2299 true scaffold_4: 14796139-14798437 Capsella rubella
Carub.0004s3014 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14796139-14797138 Capsella rubella
Carub.0004s3014 1.0kb downstream 1.0kb downstream 2299 true scaffold_4: 14797139-14799437 Capsella rubella
Carub.0004s3014 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14798438-14799437 Capsella rubella
Carub.0004s3014 2.0kb upstream 2.0kb upstream 3299 true scaffold_4: 14795139-14798437 Capsella rubella
Carub.0004s3014 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14795139-14797138 Capsella rubella
Carub.0004s3014 2.0kb downstream 2.0kb downstream 3299 true scaffold_4: 14797139-14800437 Capsella rubella
Carub.0004s3014 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14798438-14800437 Capsella rubella
Carub.0004s3014 5.0kb upstream 5.0kb upstream 6299 true scaffold_4: 14792139-14798437 Capsella rubella
Carub.0004s3014 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14792139-14797138 Capsella rubella
Carub.0004s3014 5.0kb downstream 5.0kb downstream 6299 true scaffold_4: 14797139-14803437 Capsella rubella
Carub.0004s3014 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14798438-14803437 Capsella rubella
Carub.0004s3014 10.0kb upstream 10.0kb upstream 11299 true scaffold_4: 14787139-14798437 Capsella rubella
Carub.0004s3014 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14787139-14797138 Capsella rubella
Carub.0004s3014 10.0kb downstream 10.0kb downstream 11299 true scaffold_4: 14797139-14808437 Capsella rubella
Carub.0004s3014 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14798438-14808437 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366148 5261 Brassicaceae View MSA
123832903 5264 Brassicales-Malvales View MSA
124345545 5266 SBM View MSA
124238530 5268 Malvidae View MSA
124060934 5270 Rosid View MSA
123741013 5271 Pentapetalae View MSA
122790361 5272 Eudicot View MSA
122042142 5273 Angiosperm View MSA
121344705 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain