Gene : Carub.0045s0002 C. rubella v1.1
Defline:  (1 of 37) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  2
Name:  ? Carub.0045s0002 Secondary Identifier:  ? PAC:39231815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0045s0002 0.5kb upstream 0.5kb upstream 2692 true scaffold_45: 25414-28105 Capsella rubella
Carub.0045s0002 0.5kb upstream 0.5kb upstream 500 false scaffold_45: 25414-25913 Capsella rubella
Carub.0045s0002 0.5kb downstream 0.5kb downstream 2692 true scaffold_45: 25914-28605 Capsella rubella
Carub.0045s0002 0.5kb downstream 0.5kb downstream 500 false scaffold_45: 28106-28605 Capsella rubella
Carub.0045s0002 1.0kb upstream 1.0kb upstream 3192 true scaffold_45: 24914-28105 Capsella rubella
Carub.0045s0002 1.0kb upstream 1.0kb upstream 1000 false scaffold_45: 24914-25913 Capsella rubella
Carub.0045s0002 1.0kb downstream 1.0kb downstream 3192 true scaffold_45: 25914-29105 Capsella rubella
Carub.0045s0002 1.0kb downstream 1.0kb downstream 1000 false scaffold_45: 28106-29105 Capsella rubella
Carub.0045s0002 2.0kb upstream 2.0kb upstream 4192 true scaffold_45: 23914-28105 Capsella rubella
Carub.0045s0002 2.0kb upstream 2.0kb upstream 2000 false scaffold_45: 23914-25913 Capsella rubella
Carub.0045s0002 2.0kb downstream 2.0kb downstream 4192 true scaffold_45: 25914-30105 Capsella rubella
Carub.0045s0002 2.0kb downstream 2.0kb downstream 2000 false scaffold_45: 28106-30105 Capsella rubella
Carub.0045s0002 5.0kb upstream 5.0kb upstream 7192 true scaffold_45: 20914-28105 Capsella rubella
Carub.0045s0002 5.0kb upstream 5.0kb upstream 5000 false scaffold_45: 20914-25913 Capsella rubella
Carub.0045s0002 5.0kb downstream 5.0kb downstream 7192 true scaffold_45: 25914-33105 Capsella rubella
Carub.0045s0002 5.0kb downstream 5.0kb downstream 5000 false scaffold_45: 28106-33105 Capsella rubella
Carub.0045s0002 10.0kb upstream 10.0kb upstream 12192 true scaffold_45: 15914-28105 Capsella rubella
Carub.0045s0002 10.0kb upstream 10.0kb upstream 10000 false scaffold_45: 15914-25913 Capsella rubella
Carub.0045s0002 10.0kb downstream 10.0kb downstream 10695 true scaffold_45: 25914-36608 Capsella rubella
Carub.0045s0002 10.0kb downstream 10.0kb downstream 8503 false scaffold_45: 28106-36608 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122338917 5261 Brassicaceae View MSA
123779436 5264 Brassicales-Malvales View MSA
124277760 5266 SBM View MSA
124132928 5268 Malvidae View MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain