Gene : Carub.0004s2831 C. rubella v1.1
Defline:  (1 of 4) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  2831
Name:  ? Carub.0004s2831 Secondary Identifier:  ? PAC:39239173
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s2831 0.5kb upstream 0.5kb upstream 3981 true scaffold_4: 14058450-14062430 Capsella rubella
Carub.0004s2831 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14061931-14062430 Capsella rubella
Carub.0004s2831 0.5kb downstream 0.5kb downstream 3981 true scaffold_4: 14057950-14061930 Capsella rubella
Carub.0004s2831 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14057950-14058449 Capsella rubella
Carub.0004s2831 1.0kb upstream 1.0kb upstream 4481 true scaffold_4: 14058450-14062930 Capsella rubella
Carub.0004s2831 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14061931-14062930 Capsella rubella
Carub.0004s2831 1.0kb downstream 1.0kb downstream 4481 true scaffold_4: 14057450-14061930 Capsella rubella
Carub.0004s2831 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14057450-14058449 Capsella rubella
Carub.0004s2831 2.0kb upstream 2.0kb upstream 5481 true scaffold_4: 14058450-14063930 Capsella rubella
Carub.0004s2831 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14061931-14063930 Capsella rubella
Carub.0004s2831 2.0kb downstream 2.0kb downstream 5481 true scaffold_4: 14056450-14061930 Capsella rubella
Carub.0004s2831 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14056450-14058449 Capsella rubella
Carub.0004s2831 5.0kb upstream 5.0kb upstream 8481 true scaffold_4: 14058450-14066930 Capsella rubella
Carub.0004s2831 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14061931-14066930 Capsella rubella
Carub.0004s2831 5.0kb downstream 5.0kb downstream 8481 true scaffold_4: 14053450-14061930 Capsella rubella
Carub.0004s2831 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14053450-14058449 Capsella rubella
Carub.0004s2831 10.0kb upstream 10.0kb upstream 13481 true scaffold_4: 14058450-14071930 Capsella rubella
Carub.0004s2831 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14061931-14071930 Capsella rubella
Carub.0004s2831 10.0kb downstream 10.0kb downstream 13481 true scaffold_4: 14048450-14061930 Capsella rubella
Carub.0004s2831 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14048450-14058449 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380649 5261 Brassicaceae View MSA
123834671 5264 Brassicales-Malvales View MSA
124347813 5266 SBM View MSA
124252932 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain