Protein Family : AGAMOUS-like 20 124252932

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  85
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85 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30147.t000404 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 R. communis v0.1 10678   30147: 484679-495356
30174.t000333 (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1806   30174: 1111635-1113440
30190.t000334 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 R. communis v0.1 2012   30190: 1795689-1797700
orange1.1g033166m.g (1 of 1) PTHR11945//PTHR11945:SF215 - MADS BOX PROTEIN C. sinensis v1.1 2108   scaffold00062: 552284-554391
orange1.1g027691m.g (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN C. sinensis v1.1 6410   scaffold00001: 1502965-1509374
AT4G11880 (1 of 39) PF00319//PF01486 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box) A. thaliana TAIR10 AGL14 4277   Chr4: 7143115-7147391
AT4G22950 (1 of 1) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED A. thaliana TAIR10 AGL19 3507   Chr4: 12023915-12027421
AT5G62165 (1 of 3) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 A. thaliana TAIR10 AGL42 3821   Chr5: 24964700-24968520
AT2G45660 (1 of 3) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 A. thaliana TAIR10 AGL20 3510   Chr2: 18807538-18811047
Thhalv10027077m.g (1 of 3) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED E. salsugineum v1.0 2045   scaffold_1: 7345355-7347399
Thhalv10001632m.g (1 of 5) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 E. salsugineum v1.0 3541   scaffold_22: 932239-935779
Thhalv10028949m.g (1 of 3) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED E. salsugineum v1.0 5463   scaffold_3: 3632442-3637904
Thhalv10004954m.g (1 of 5) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 E. salsugineum v1.0 3669   scaffold_6: 2173165-2176833
Ciclev10022936m.g (1 of 1) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 C. clementina v1.0 3012   scaffold_3: 6631932-6634943
Ciclev10022568m.g (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN C. clementina v1.0 6362   scaffold_3: 49483585-49489946
Ciclev10006217m.g (1 of 1) PTHR11945//PTHR11945:SF215 - MADS BOX PROTEIN C. clementina v1.0 2037   scaffold_9: 28421144-28423180
Lus10006715.g (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED L. usitatissimum v1.0 3556   scaffold2932: 239965-243520
Lus10014143.g (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED L. usitatissimum v1.0 3319   scaffold231: 27242-30560
Lus10041385.g (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN L. usitatissimum v1.0 1704   scaffold280: 2191958-2193661
Lus10036542.g (1 of 4) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 L. usitatissimum v1.0 1747   scaffold57: 1141490-1143236
Lus10031665.g (1 of 4) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 L. usitatissimum v1.0 3176   scaffold783: 69866-73041
Lus10027404.g (1 of 45) PF00319//PF01486 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box) L. usitatissimum v1.0 3958   scaffold96: 133176-137133
Gorai.003G163900 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 G. raimondii v2.1 7370   Chr03: 43372519-43379888
Gorai.008G242500 (1 of 1) PTHR11945//PTHR11945:SF215 - MADS BOX PROTEIN G. raimondii v2.1 1071   Chr08: 52811262-52812332
Gorai.008G115200 (1 of 6) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN G. raimondii v2.1 5056   Chr08: 34779081-34784136
Gorai.007G009800 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 G. raimondii v2.1 6503   Chr07: 764245-770747
Thecc1EG005456 (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 8015   scaffold_1: 36719705-36727719
Thecc1EG015049 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 T. cacao v1.1 6575   scaffold_3: 25927524-25934098
Thecc1EG016147 (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 T. cacao v1.1 7582   scaffold_3: 31506777-31514358
Araha.2214s0024 (1 of 3) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 A. halleri v1.1 3314   Scaffold2214: 135334-138647

85 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30190.m011098 R. communis v0.1 124252932 AGAMOUS-like 20 3 5268 Malvidae
orange1.1g033166m C. sinensis v1.1 124252932 AGAMOUS-like 20 2 5268 Malvidae
orange1.1g027691m C. sinensis v1.1 124252932 AGAMOUS-like 20 2 5268 Malvidae
AT4G22950.1 A. thaliana TAIR10 124252932 AGAMOUS-like 20 4 5268 Malvidae
Thhalv10001632m E. salsugineum v1.0 124252932 AGAMOUS-like 20 4 5268 Malvidae
Thhalv10027077m E. salsugineum v1.0 124252932 AGAMOUS-like 20 4 5268 Malvidae
Thhalv10028949m E. salsugineum v1.0 124252932 AGAMOUS-like 20 4 5268 Malvidae
Lus10006715 L. usitatissimum v1.0 124252932 AGAMOUS-like 20 6 5268 Malvidae
Lus10036542 L. usitatissimum v1.0 124252932 AGAMOUS-like 20 6 5268 Malvidae
Araha.17932s0004.1.p A. halleri v1.1 124252932 AGAMOUS-like 20 4 5268 Malvidae
Cagra.0277s0031.1.p C. grandiflora v1.1 124252932 AGAMOUS-like 20 5 5268 Malvidae
Brara.D02757.1.p B. rapa FPsc v1.3 124252932 AGAMOUS-like 20 10 5268 Malvidae
SapurV1A.0024s0570.1.p S. purpurea v1.0 124252932 AGAMOUS-like 20 6 5268 Malvidae
SapurV1A.0045s0580.1.p S. purpurea v1.0 124252932 AGAMOUS-like 20 6 5268 Malvidae
Manes.02G030100.1.p M. esculenta v6.1 124252932 AGAMOUS-like 20 6 5268 Malvidae
Manes.01G025600.1.p M. esculenta v6.1 124252932 AGAMOUS-like 20 6 5268 Malvidae
AL4G44830.t1 A. lyrata v2.1 124252932 AGAMOUS-like 20 5 5268 Malvidae
Potri.012G133000.6.p P. trichocarpa v3.1 124252932 AGAMOUS-like 20 5 5268 Malvidae
Podel.12G140600.1.p P. deltoides WV94 v2.1 124252932 AGAMOUS-like 20 8 5268 Malvidae
Podel.14G074800.1.p P. deltoides WV94 v2.1 124252932 AGAMOUS-like 20 8 5268 Malvidae
Podel.02G167800.1.p P. deltoides WV94 v2.1 124252932 AGAMOUS-like 20 8 5268 Malvidae
Podel.01G118800.1.p P. deltoides WV94 v2.1 124252932 AGAMOUS-like 20 8 5268 Malvidae
Podel.T214900.1.p P. deltoides WV94 v2.1 124252932 AGAMOUS-like 20 8 5268 Malvidae
30147.m014133 R. communis v0.1 124252932 AGAMOUS-like 20 3 5268 Malvidae
30174.m008936 R. communis v0.1 124252932 AGAMOUS-like 20 3 5268 Malvidae
AT2G45660.1 A. thaliana TAIR10 124252932 AGAMOUS-like 20 4 5268 Malvidae
AT4G11880.1 A. thaliana TAIR10 124252932 AGAMOUS-like 20 4 5268 Malvidae
AT5G62165.1 A. thaliana TAIR10 124252932 AGAMOUS-like 20 4 5268 Malvidae
Thhalv10004954m E. salsugineum v1.0 124252932 AGAMOUS-like 20 4 5268 Malvidae
Ciclev10022568m C. clementina v1.0 124252932 AGAMOUS-like 20 3 5268 Malvidae