Gene : Gorai.003G163900 G. raimondii v2.1
Defline:  (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  1639
Name:  ? Gorai.003G163900 Secondary Identifier:  ? PAC:26798547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.003G163900 0.5kb upstream 0.5kb upstream 7870 true Chr03: 43372019-43379888 Gossypium raimondii
Gorai.003G163900 0.5kb upstream 0.5kb upstream 500 false Chr03: 43372019-43372518 Gossypium raimondii
Gorai.003G163900 0.5kb downstream 0.5kb downstream 7870 true Chr03: 43372519-43380388 Gossypium raimondii
Gorai.003G163900 0.5kb downstream 0.5kb downstream 500 false Chr03: 43379889-43380388 Gossypium raimondii
Gorai.003G163900 1.0kb upstream 1.0kb upstream 8370 true Chr03: 43371519-43379888 Gossypium raimondii
Gorai.003G163900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43371519-43372518 Gossypium raimondii
Gorai.003G163900 1.0kb downstream 1.0kb downstream 8370 true Chr03: 43372519-43380888 Gossypium raimondii
Gorai.003G163900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43379889-43380888 Gossypium raimondii
Gorai.003G163900 2.0kb upstream 2.0kb upstream 9370 true Chr03: 43370519-43379888 Gossypium raimondii
Gorai.003G163900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43370519-43372518 Gossypium raimondii
Gorai.003G163900 2.0kb downstream 2.0kb downstream 9370 true Chr03: 43372519-43381888 Gossypium raimondii
Gorai.003G163900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43379889-43381888 Gossypium raimondii
Gorai.003G163900 5.0kb upstream 5.0kb upstream 12370 true Chr03: 43367519-43379888 Gossypium raimondii
Gorai.003G163900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43367519-43372518 Gossypium raimondii
Gorai.003G163900 5.0kb downstream 5.0kb downstream 12370 true Chr03: 43372519-43384888 Gossypium raimondii
Gorai.003G163900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43379889-43384888 Gossypium raimondii
Gorai.003G163900 10.0kb upstream 10.0kb upstream 17370 true Chr03: 43362519-43379888 Gossypium raimondii
Gorai.003G163900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43362519-43372518 Gossypium raimondii
Gorai.003G163900 10.0kb downstream 10.0kb downstream 17370 true Chr03: 43372519-43389888 Gossypium raimondii
Gorai.003G163900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43379889-43389888 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838717 5264 Brassicales-Malvales View MSA
124322492 5266 SBM View MSA
124252932 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain