Gene : Thecc1EG016147 T. cacao v1.1
Defline:  (1 of 2) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  2649
Name:  ? Thecc1EG016147 Secondary Identifier:  ? PAC:27447471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016147 0.5kb upstream 0.5kb upstream 8082 true scaffold_3: 31506777-31514858 Theobroma cacao
Thecc1EG016147 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 31514359-31514858 Theobroma cacao
Thecc1EG016147 0.5kb downstream 0.5kb downstream 8082 true scaffold_3: 31506277-31514358 Theobroma cacao
Thecc1EG016147 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 31506277-31506776 Theobroma cacao
Thecc1EG016147 1.0kb upstream 1.0kb upstream 8582 true scaffold_3: 31506777-31515358 Theobroma cacao
Thecc1EG016147 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 31514359-31515358 Theobroma cacao
Thecc1EG016147 1.0kb downstream 1.0kb downstream 8582 true scaffold_3: 31505777-31514358 Theobroma cacao
Thecc1EG016147 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 31505777-31506776 Theobroma cacao
Thecc1EG016147 2.0kb upstream 2.0kb upstream 9582 true scaffold_3: 31506777-31516358 Theobroma cacao
Thecc1EG016147 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 31514359-31516358 Theobroma cacao
Thecc1EG016147 2.0kb downstream 2.0kb downstream 9582 true scaffold_3: 31504777-31514358 Theobroma cacao
Thecc1EG016147 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 31504777-31506776 Theobroma cacao
Thecc1EG016147 5.0kb upstream 5.0kb upstream 12582 true scaffold_3: 31506777-31519358 Theobroma cacao
Thecc1EG016147 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 31514359-31519358 Theobroma cacao
Thecc1EG016147 5.0kb downstream 5.0kb downstream 12582 true scaffold_3: 31501777-31514358 Theobroma cacao
Thecc1EG016147 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 31501777-31506776 Theobroma cacao
Thecc1EG016147 10.0kb upstream 10.0kb upstream 17582 true scaffold_3: 31506777-31524358 Theobroma cacao
Thecc1EG016147 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 31514359-31524358 Theobroma cacao
Thecc1EG016147 10.0kb downstream 10.0kb downstream 17582 true scaffold_3: 31496777-31514358 Theobroma cacao
Thecc1EG016147 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 31496777-31506776 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838717 5264 Brassicales-Malvales View MSA
124322492 5266 SBM View MSA
124252932 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain