Gene : Thecc1EG005456 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3675
Name:  ? Thecc1EG005456 Secondary Identifier:  ? PAC:27434961
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005456 0.5kb upstream 0.5kb upstream 8515 true scaffold_1: 36719205-36727719 Theobroma cacao
Thecc1EG005456 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36719205-36719704 Theobroma cacao
Thecc1EG005456 0.5kb downstream 0.5kb downstream 8515 true scaffold_1: 36719705-36728219 Theobroma cacao
Thecc1EG005456 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36727720-36728219 Theobroma cacao
Thecc1EG005456 1.0kb upstream 1.0kb upstream 9015 true scaffold_1: 36718705-36727719 Theobroma cacao
Thecc1EG005456 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36718705-36719704 Theobroma cacao
Thecc1EG005456 1.0kb downstream 1.0kb downstream 9015 true scaffold_1: 36719705-36728719 Theobroma cacao
Thecc1EG005456 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36727720-36728719 Theobroma cacao
Thecc1EG005456 2.0kb upstream 2.0kb upstream 10015 true scaffold_1: 36717705-36727719 Theobroma cacao
Thecc1EG005456 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36717705-36719704 Theobroma cacao
Thecc1EG005456 2.0kb downstream 2.0kb downstream 10015 true scaffold_1: 36719705-36729719 Theobroma cacao
Thecc1EG005456 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36727720-36729719 Theobroma cacao
Thecc1EG005456 5.0kb upstream 5.0kb upstream 13015 true scaffold_1: 36714705-36727719 Theobroma cacao
Thecc1EG005456 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36714705-36719704 Theobroma cacao
Thecc1EG005456 5.0kb downstream 5.0kb downstream 13015 true scaffold_1: 36719705-36732719 Theobroma cacao
Thecc1EG005456 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36727720-36732719 Theobroma cacao
Thecc1EG005456 10.0kb upstream 10.0kb upstream 18015 true scaffold_1: 36709705-36727719 Theobroma cacao
Thecc1EG005456 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36709705-36719704 Theobroma cacao
Thecc1EG005456 10.0kb downstream 10.0kb downstream 18015 true scaffold_1: 36719705-36737719 Theobroma cacao
Thecc1EG005456 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36727720-36737719 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834671 5264 Brassicales-Malvales View MSA
124347813 5266 SBM View MSA
124252932 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain