Gene : Carub.0005s0282 C. rubella v1.1
Defline:  (1 of 1) PTHR33403:SF1 - PROTEIN SPIRAL1 Genomic Order:  282
Name:  ? Carub.0005s0282 Secondary Identifier:  ? PAC:39226085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0282 0.5kb upstream 0.5kb upstream 2065 true scaffold_5: 1127106-1129170 Capsella rubella
Carub.0005s0282 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1127106-1127605 Capsella rubella
Carub.0005s0282 0.5kb downstream 0.5kb downstream 2065 true scaffold_5: 1127606-1129670 Capsella rubella
Carub.0005s0282 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1129171-1129670 Capsella rubella
Carub.0005s0282 1.0kb upstream 1.0kb upstream 2565 true scaffold_5: 1126606-1129170 Capsella rubella
Carub.0005s0282 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1126606-1127605 Capsella rubella
Carub.0005s0282 1.0kb downstream 1.0kb downstream 2565 true scaffold_5: 1127606-1130170 Capsella rubella
Carub.0005s0282 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1129171-1130170 Capsella rubella
Carub.0005s0282 2.0kb upstream 2.0kb upstream 3565 true scaffold_5: 1125606-1129170 Capsella rubella
Carub.0005s0282 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1125606-1127605 Capsella rubella
Carub.0005s0282 2.0kb downstream 2.0kb downstream 3565 true scaffold_5: 1127606-1131170 Capsella rubella
Carub.0005s0282 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1129171-1131170 Capsella rubella
Carub.0005s0282 5.0kb upstream 5.0kb upstream 6565 true scaffold_5: 1122606-1129170 Capsella rubella
Carub.0005s0282 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1122606-1127605 Capsella rubella
Carub.0005s0282 5.0kb downstream 5.0kb downstream 6565 true scaffold_5: 1127606-1134170 Capsella rubella
Carub.0005s0282 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1129171-1134170 Capsella rubella
Carub.0005s0282 10.0kb upstream 10.0kb upstream 11565 true scaffold_5: 1117606-1129170 Capsella rubella
Carub.0005s0282 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1117606-1127605 Capsella rubella
Carub.0005s0282 10.0kb downstream 10.0kb downstream 11565 true scaffold_5: 1127606-1139170 Capsella rubella
Carub.0005s0282 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1129171-1139170 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368697 5261 Brassicaceae View MSA
123799633 5264 Brassicales-Malvales View MSA
124348761 5266 SBM View MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain