Gene : Carub.0005s0021 C. rubella v1.1
Defline:  (1 of 3) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  21
Name:  ? Carub.0005s0021 Secondary Identifier:  ? PAC:39225351
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0021 0.5kb upstream 0.5kb upstream 4131 true scaffold_5: 70957-75087 Capsella rubella
Carub.0005s0021 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 70957-71456 Capsella rubella
Carub.0005s0021 0.5kb downstream 0.5kb downstream 4131 true scaffold_5: 71457-75587 Capsella rubella
Carub.0005s0021 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 75088-75587 Capsella rubella
Carub.0005s0021 1.0kb upstream 1.0kb upstream 4631 true scaffold_5: 70457-75087 Capsella rubella
Carub.0005s0021 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 70457-71456 Capsella rubella
Carub.0005s0021 1.0kb downstream 1.0kb downstream 4631 true scaffold_5: 71457-76087 Capsella rubella
Carub.0005s0021 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 75088-76087 Capsella rubella
Carub.0005s0021 2.0kb upstream 2.0kb upstream 5631 true scaffold_5: 69457-75087 Capsella rubella
Carub.0005s0021 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 69457-71456 Capsella rubella
Carub.0005s0021 2.0kb downstream 2.0kb downstream 5631 true scaffold_5: 71457-77087 Capsella rubella
Carub.0005s0021 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 75088-77087 Capsella rubella
Carub.0005s0021 5.0kb upstream 5.0kb upstream 8631 true scaffold_5: 66457-75087 Capsella rubella
Carub.0005s0021 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 66457-71456 Capsella rubella
Carub.0005s0021 5.0kb downstream 5.0kb downstream 8631 true scaffold_5: 71457-80087 Capsella rubella
Carub.0005s0021 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 75088-80087 Capsella rubella
Carub.0005s0021 10.0kb upstream 10.0kb upstream 13631 true scaffold_5: 61457-75087 Capsella rubella
Carub.0005s0021 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 61457-71456 Capsella rubella
Carub.0005s0021 10.0kb downstream 10.0kb downstream 13631 true scaffold_5: 71457-85087 Capsella rubella
Carub.0005s0021 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 75088-85087 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370163 5261 Brassicaceae View MSA
123830198 5264 Brassicales-Malvales View MSA
124346526 5266 SBM View MSA
124243037 5268 Malvidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain