Gene : Carub.0005s0463 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  463
Name:  ? Carub.0005s0463 Secondary Identifier:  ? PAC:39226828
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0463 0.5kb upstream 0.5kb upstream 2133 true scaffold_5: 1849211-1851343 Capsella rubella
Carub.0005s0463 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1850844-1851343 Capsella rubella
Carub.0005s0463 0.5kb downstream 0.5kb downstream 2133 true scaffold_5: 1848711-1850843 Capsella rubella
Carub.0005s0463 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1848711-1849210 Capsella rubella
Carub.0005s0463 1.0kb upstream 1.0kb upstream 2633 true scaffold_5: 1849211-1851843 Capsella rubella
Carub.0005s0463 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1850844-1851843 Capsella rubella
Carub.0005s0463 1.0kb downstream 1.0kb downstream 2633 true scaffold_5: 1848211-1850843 Capsella rubella
Carub.0005s0463 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1848211-1849210 Capsella rubella
Carub.0005s0463 2.0kb upstream 2.0kb upstream 3633 true scaffold_5: 1849211-1852843 Capsella rubella
Carub.0005s0463 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1850844-1852843 Capsella rubella
Carub.0005s0463 2.0kb downstream 2.0kb downstream 3633 true scaffold_5: 1847211-1850843 Capsella rubella
Carub.0005s0463 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1847211-1849210 Capsella rubella
Carub.0005s0463 5.0kb upstream 5.0kb upstream 6633 true scaffold_5: 1849211-1855843 Capsella rubella
Carub.0005s0463 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1850844-1855843 Capsella rubella
Carub.0005s0463 5.0kb downstream 5.0kb downstream 6633 true scaffold_5: 1844211-1850843 Capsella rubella
Carub.0005s0463 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1844211-1849210 Capsella rubella
Carub.0005s0463 10.0kb upstream 10.0kb upstream 11633 true scaffold_5: 1849211-1860843 Capsella rubella
Carub.0005s0463 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1850844-1860843 Capsella rubella
Carub.0005s0463 10.0kb downstream 10.0kb downstream 11633 true scaffold_5: 1839211-1850843 Capsella rubella
Carub.0005s0463 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1839211-1849210 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365188 5261 Brassicaceae View MSA
123798911 5264 Brassicales-Malvales View MSA
124346450 5266 SBM View MSA
124243436 5268 Malvidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain