Gene : Carub.0005s0455 C. rubella v1.1
Defline:  (1 of 1) PF00270//PF00271//PF00575//PF04408//PF07717 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // S1 RNA binding domain (S1) // Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind) Genomic Order:  455
Name:  ? Carub.0005s0455 Secondary Identifier:  ? PAC:39225642
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0455 0.5kb upstream 0.5kb upstream 4413 true scaffold_5: 1817837-1822249 Capsella rubella
Carub.0005s0455 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1821750-1822249 Capsella rubella
Carub.0005s0455 0.5kb downstream 0.5kb downstream 4413 true scaffold_5: 1817337-1821749 Capsella rubella
Carub.0005s0455 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1817337-1817836 Capsella rubella
Carub.0005s0455 1.0kb upstream 1.0kb upstream 4913 true scaffold_5: 1817837-1822749 Capsella rubella
Carub.0005s0455 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1821750-1822749 Capsella rubella
Carub.0005s0455 1.0kb downstream 1.0kb downstream 4913 true scaffold_5: 1816837-1821749 Capsella rubella
Carub.0005s0455 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1816837-1817836 Capsella rubella
Carub.0005s0455 2.0kb upstream 2.0kb upstream 5913 true scaffold_5: 1817837-1823749 Capsella rubella
Carub.0005s0455 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1821750-1823749 Capsella rubella
Carub.0005s0455 2.0kb downstream 2.0kb downstream 5913 true scaffold_5: 1815837-1821749 Capsella rubella
Carub.0005s0455 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1815837-1817836 Capsella rubella
Carub.0005s0455 5.0kb upstream 5.0kb upstream 8913 true scaffold_5: 1817837-1826749 Capsella rubella
Carub.0005s0455 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1821750-1826749 Capsella rubella
Carub.0005s0455 5.0kb downstream 5.0kb downstream 8913 true scaffold_5: 1812837-1821749 Capsella rubella
Carub.0005s0455 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1812837-1817836 Capsella rubella
Carub.0005s0455 10.0kb upstream 10.0kb upstream 13913 true scaffold_5: 1817837-1831749 Capsella rubella
Carub.0005s0455 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1821750-1831749 Capsella rubella
Carub.0005s0455 10.0kb downstream 10.0kb downstream 13913 true scaffold_5: 1807837-1821749 Capsella rubella
Carub.0005s0455 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1807837-1817836 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343216 5261 Brassicaceae View MSA
123838547 5264 Brassicales-Malvales View MSA
124345704 5266 SBM View MSA
124252464 5268 Malvidae View MSA
124065617 5270 Rosid View MSA
123749585 5271 Pentapetalae View MSA
122791616 5272 Eudicot View MSA
122047239 5273 Angiosperm View MSA
121347045 5274 Embryophyte View MSA
123427564 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain