Protein Family : RNA helicase family protein 124252464

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  43

43 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000146 (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED R. communis v0.1 4820   30170: 4671611-4676430
29615.t000013 (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) R. communis v0.1 21262   29615: 373581-394842
27632.t000004 (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED R. communis v0.1 3096   27632: 42342-45437
orange1.1g001046m.g (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE C. sinensis v1.1 5812   scaffold00017: 476228-482039
AT3G26560 (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED A. thaliana TAIR10 3869   Chr3: 9749904-9753772
AT1G32490 (1 of 1) PTHR18934//PTHR18934:SF117//PTHR18934:SF83 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED // PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16-RELATED A. thaliana TAIR10 ESP3 7735   Chr1: 11742054-11749788
AT2G35340 (1 of 1) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED A. thaliana TAIR10 MEE29 7420   Chr2: 14872320-14879739
Thhalv10017881m.g (1 of 2) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE E. salsugineum v1.0 7050   scaffold_10: 8150725-8157774
Thhalv10028287m.g (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE E. salsugineum v1.0 3039   scaffold_14: 6731134-6734172
Thhalv10006650m.g (1 of 2) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE E. salsugineum v1.0 7403   scaffold_5: 2486513-2493915
Ciclev10023841m.g (1 of 2) PTHR18934:SF83 - PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16-RELATED C. clementina v1.0 4409   scaffold_3: 7306772-7311180
Ciclev10024740m.g (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE C. clementina v1.0 5904   scaffold_7: 1406407-1412310
Lus10036783.g (1 of 1) PF00270//PF00271//PF00575//PF04408//PF07717 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // S1 RNA binding domain (S1) // Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind) L. usitatissimum v1.0 3864   scaffold31: 596901-600764
Lus10037145.g (1 of 1) PF00270//PF00271//PF00575//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // S1 RNA binding domain (S1) // Helicase associated domain (HA2) (HA2) L. usitatissimum v1.0 3282   scaffold462: 400810-404091
Lus10031647.g (1 of 2) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE L. usitatissimum v1.0 8454   scaffold863: 1273369-1281822
Gorai.008G197200 (1 of 1) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE G. raimondii v2.1 6329   Chr08: 48161550-48167878
Gorai.011G007600 (1 of 2) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE G. raimondii v2.1 4551   Chr11: 569884-574434
Thecc1EG014166 (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) T. cacao v1.1 15734   scaffold_3: 20345704-20361437
Thecc1EG034192 (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED T. cacao v1.1 5349   scaffold_8: 1837834-1843182
Araha.5099s0004 (1 of 2) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE A. halleri v1.1 7653   Scaffold5099: 13052-20704
Araha.20181s0002 (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE A. halleri v1.1 4083   Scaffold20181: 4592-8674
Araha.7846s0001 (1 of 2) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE A. halleri v1.1 6889   Scaffold7846: 7707-14595
Cagra.0993s0042 (1 of 2) PTHR18934:SF83 - PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16-RELATED C. grandiflora v1.1 7157   Scaffold993: 138409-145565
Cagra.3598s0003 (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE C. grandiflora v1.1 3541   Scaffold3598: 8296-11836
Cagra.7865s0011 (1 of 1) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE C. grandiflora v1.1 8344   Scaffold7865: 38671-47014
Brara.E01777 (1 of 1) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE B. rapa FPsc v1.3 9428   A05: 13296898-13306325
Bostr.3359s0111 (1 of 3) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE B. stricta v1.2 7647   Scaffold3359: 1143116-1150762
Bostr.0556s0326 (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE B. stricta v1.2 3864   Scaffold556: 1972866-1976729
Bostr.23794s0568 (1 of 3) PTHR18934//PTHR18934:SF117 - ATP-DEPENDENT RNA HELICASE B. stricta v1.2 6828   Scaffold23794: 3250916-3257743
SapurV1A.1574s0030 (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) S. purpurea v1.0 16347   chr15: 1874748-1891094

43 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27632.m000168 R. communis v0.1 124252464 RNA helicase family protein 3 5268 Malvidae
Thhalv10028287m E. salsugineum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Ciclev10024740m C. clementina v1.0 124252464 RNA helicase family protein 2 5268 Malvidae
Lus10037145 L. usitatissimum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Lus10036783 L. usitatissimum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Gorai.011G007600.1 G. raimondii v2.1 124252464 RNA helicase family protein 2 5268 Malvidae
Gorai.008G197200.1 G. raimondii v2.1 124252464 RNA helicase family protein 2 5268 Malvidae
Araha.5099s0004.1.p A. halleri v1.1 124252464 RNA helicase family protein 3 5268 Malvidae
Cagra.7865s0011.1.p C. grandiflora v1.1 124252464 RNA helicase family protein 3 5268 Malvidae
Bostr.23794s0568.1.p B. stricta v1.2 124252464 RNA helicase family protein 3 5268 Malvidae
Bostr.0556s0326.1.p B. stricta v1.2 124252464 RNA helicase family protein 3 5268 Malvidae
Manes.04G050000.1.p M. esculenta v6.1 124252464 RNA helicase family protein 3 5268 Malvidae
AL4G31370.t1 A. lyrata v2.1 124252464 RNA helicase family protein 3 5268 Malvidae
AL1G46740.t1 A. lyrata v2.1 124252464 RNA helicase family protein 3 5268 Malvidae
Potri.015G008700.2.p P. trichocarpa v3.1 124252464 RNA helicase family protein 2 5268 Malvidae
Podel.15G008700.1.p P. deltoides WV94 v2.1 124252464 RNA helicase family protein 2 5268 Malvidae
Carub.0005s0455.1.p C. rubella v1.1 124252464 RNA helicase family protein 2 5268 Malvidae
30170.m013734 R. communis v0.1 124252464 RNA helicase family protein 3 5268 Malvidae
29615.m000501 R. communis v0.1 124252464 RNA helicase family protein 3 5268 Malvidae
orange1.1g001046m C. sinensis v1.1 124252464 RNA helicase family protein 1 5268 Malvidae
AT2G35340.1 A. thaliana TAIR10 124252464 RNA helicase family protein 3 5268 Malvidae
AT3G26560.1 A. thaliana TAIR10 124252464 RNA helicase family protein 3 5268 Malvidae
AT1G32490.1 A. thaliana TAIR10 124252464 RNA helicase family protein 3 5268 Malvidae
Thhalv10006650m E. salsugineum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Thhalv10017881m E. salsugineum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Ciclev10023841m C. clementina v1.0 124252464 RNA helicase family protein 2 5268 Malvidae
Lus10031647 L. usitatissimum v1.0 124252464 RNA helicase family protein 3 5268 Malvidae
Thecc1EG014166t2 T. cacao v1.1 124252464 RNA helicase family protein 2 5268 Malvidae
Thecc1EG034192t1 T. cacao v1.1 124252464 RNA helicase family protein 2 5268 Malvidae
Araha.7846s0001.1.p A. halleri v1.1 124252464 RNA helicase family protein 3 5268 Malvidae