Gene : AT3G26560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  2798
Name:  ? AT3G26560 Secondary Identifier:  ? PAC:19663488
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26560 0.5kb upstream 0.5kb upstream 4369 true Chr3: 9749904-9754272 Arabidopsis thaliana
AT3G26560 0.5kb upstream 0.5kb upstream 500 false Chr3: 9753773-9754272 Arabidopsis thaliana
AT3G26560 0.5kb downstream 0.5kb downstream 4369 true Chr3: 9749404-9753772 Arabidopsis thaliana
AT3G26560 0.5kb downstream 0.5kb downstream 500 false Chr3: 9749404-9749903 Arabidopsis thaliana
AT3G26560 1.0kb upstream 1.0kb upstream 4869 true Chr3: 9749904-9754772 Arabidopsis thaliana
AT3G26560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9753773-9754772 Arabidopsis thaliana
AT3G26560 1.0kb downstream 1.0kb downstream 4869 true Chr3: 9748904-9753772 Arabidopsis thaliana
AT3G26560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9748904-9749903 Arabidopsis thaliana
AT3G26560 2.0kb upstream 2.0kb upstream 5869 true Chr3: 9749904-9755772 Arabidopsis thaliana
AT3G26560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9753773-9755772 Arabidopsis thaliana
AT3G26560 2.0kb downstream 2.0kb downstream 5869 true Chr3: 9747904-9753772 Arabidopsis thaliana
AT3G26560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9747904-9749903 Arabidopsis thaliana
AT3G26560 5.0kb upstream 5.0kb upstream 8869 true Chr3: 9749904-9758772 Arabidopsis thaliana
AT3G26560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9753773-9758772 Arabidopsis thaliana
AT3G26560 5.0kb downstream 5.0kb downstream 8869 true Chr3: 9744904-9753772 Arabidopsis thaliana
AT3G26560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9744904-9749903 Arabidopsis thaliana
AT3G26560 10.0kb upstream 10.0kb upstream 13869 true Chr3: 9749904-9763772 Arabidopsis thaliana
AT3G26560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9753773-9763772 Arabidopsis thaliana
AT3G26560 10.0kb downstream 10.0kb downstream 13869 true Chr3: 9739904-9753772 Arabidopsis thaliana
AT3G26560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9739904-9749903 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343216 5261 Brassicaceae View MSA
123838547 5264 Brassicales-Malvales View MSA
124345704 5266 SBM View MSA
124252464 5268 Malvidae View MSA
124065617 5270 Rosid View MSA
123749585 5271 Pentapetalae View MSA
122791616 5272 Eudicot View MSA
122047239 5273 Angiosperm View MSA
121347045 5274 Embryophyte View MSA
123427564 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4        
cufflinks 18.026        
cufflinks 14.372       Low
cufflinks 21.436       High
cufflinks 14.295       Low
cufflinks 20.082        

0 Strain