Gene : Carub.0005s0485 C. rubella v1.1
Defline:  (1 of 1) PTHR31140//PTHR31140:SF10 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 Genomic Order:  485
Name:  ? Carub.0005s0485 Secondary Identifier:  ? PAC:39225769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0485 0.5kb upstream 0.5kb upstream 6744 true scaffold_5: 1938255-1944998 Capsella rubella
Carub.0005s0485 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1944499-1944998 Capsella rubella
Carub.0005s0485 0.5kb downstream 0.5kb downstream 6744 true scaffold_5: 1937755-1944498 Capsella rubella
Carub.0005s0485 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1937755-1938254 Capsella rubella
Carub.0005s0485 1.0kb upstream 1.0kb upstream 7244 true scaffold_5: 1938255-1945498 Capsella rubella
Carub.0005s0485 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1944499-1945498 Capsella rubella
Carub.0005s0485 1.0kb downstream 1.0kb downstream 7244 true scaffold_5: 1937255-1944498 Capsella rubella
Carub.0005s0485 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1937255-1938254 Capsella rubella
Carub.0005s0485 2.0kb upstream 2.0kb upstream 8244 true scaffold_5: 1938255-1946498 Capsella rubella
Carub.0005s0485 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1944499-1946498 Capsella rubella
Carub.0005s0485 2.0kb downstream 2.0kb downstream 8244 true scaffold_5: 1936255-1944498 Capsella rubella
Carub.0005s0485 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1936255-1938254 Capsella rubella
Carub.0005s0485 5.0kb upstream 5.0kb upstream 11244 true scaffold_5: 1938255-1949498 Capsella rubella
Carub.0005s0485 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1944499-1949498 Capsella rubella
Carub.0005s0485 5.0kb downstream 5.0kb downstream 11244 true scaffold_5: 1933255-1944498 Capsella rubella
Carub.0005s0485 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1933255-1938254 Capsella rubella
Carub.0005s0485 10.0kb upstream 10.0kb upstream 16244 true scaffold_5: 1938255-1954498 Capsella rubella
Carub.0005s0485 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1944499-1954498 Capsella rubella
Carub.0005s0485 10.0kb downstream 10.0kb downstream 16244 true scaffold_5: 1928255-1944498 Capsella rubella
Carub.0005s0485 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1928255-1938254 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364195 5261 Brassicaceae View MSA
123832363 5264 Brassicales-Malvales View MSA
124342908 5266 SBM View MSA
124243783 5268 Malvidae View MSA
124063973 5270 Rosid View MSA
123741236 5271 Pentapetalae View MSA
122796776 5272 Eudicot View MSA
122050648 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain