Gene : Carub.0005s0516 C. rubella v1.1
Defline:  (1 of 1) PTHR13169//PTHR13169:SF1 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  516
Name:  ? Carub.0005s0516 Secondary Identifier:  ? PAC:39224397
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0516 0.5kb upstream 0.5kb upstream 2306 true scaffold_5: 2094022-2096327 Capsella rubella
Carub.0005s0516 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2094022-2094521 Capsella rubella
Carub.0005s0516 0.5kb downstream 0.5kb downstream 2306 true scaffold_5: 2094522-2096827 Capsella rubella
Carub.0005s0516 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2096328-2096827 Capsella rubella
Carub.0005s0516 1.0kb upstream 1.0kb upstream 2806 true scaffold_5: 2093522-2096327 Capsella rubella
Carub.0005s0516 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2093522-2094521 Capsella rubella
Carub.0005s0516 1.0kb downstream 1.0kb downstream 2806 true scaffold_5: 2094522-2097327 Capsella rubella
Carub.0005s0516 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2096328-2097327 Capsella rubella
Carub.0005s0516 2.0kb upstream 2.0kb upstream 3806 true scaffold_5: 2092522-2096327 Capsella rubella
Carub.0005s0516 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2092522-2094521 Capsella rubella
Carub.0005s0516 2.0kb downstream 2.0kb downstream 3806 true scaffold_5: 2094522-2098327 Capsella rubella
Carub.0005s0516 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2096328-2098327 Capsella rubella
Carub.0005s0516 5.0kb upstream 5.0kb upstream 6806 true scaffold_5: 2089522-2096327 Capsella rubella
Carub.0005s0516 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2089522-2094521 Capsella rubella
Carub.0005s0516 5.0kb downstream 5.0kb downstream 6806 true scaffold_5: 2094522-2101327 Capsella rubella
Carub.0005s0516 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2096328-2101327 Capsella rubella
Carub.0005s0516 10.0kb upstream 10.0kb upstream 11806 true scaffold_5: 2084522-2096327 Capsella rubella
Carub.0005s0516 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2084522-2094521 Capsella rubella
Carub.0005s0516 10.0kb downstream 10.0kb downstream 11806 true scaffold_5: 2094522-2106327 Capsella rubella
Carub.0005s0516 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2096328-2106327 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378779 5261 Brassicaceae View MSA
123836115 5264 Brassicales-Malvales View MSA
124341541 5266 SBM View MSA
124248772 5268 Malvidae View MSA
124067947 5270 Rosid View MSA
123739636 5271 Pentapetalae View MSA
122787599 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain