Gene : Carub.0005s0563 C. rubella v1.1
Defline:  (1 of 2) PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  563
Name:  ? Carub.0005s0563 Secondary Identifier:  ? PAC:39226036
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0563 0.5kb upstream 0.5kb upstream 4241 true scaffold_5: 2292553-2296793 Capsella rubella
Carub.0005s0563 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2296294-2296793 Capsella rubella
Carub.0005s0563 0.5kb downstream 0.5kb downstream 4241 true scaffold_5: 2292053-2296293 Capsella rubella
Carub.0005s0563 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2292053-2292552 Capsella rubella
Carub.0005s0563 1.0kb upstream 1.0kb upstream 4741 true scaffold_5: 2292553-2297293 Capsella rubella
Carub.0005s0563 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2296294-2297293 Capsella rubella
Carub.0005s0563 1.0kb downstream 1.0kb downstream 4741 true scaffold_5: 2291553-2296293 Capsella rubella
Carub.0005s0563 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2291553-2292552 Capsella rubella
Carub.0005s0563 2.0kb upstream 2.0kb upstream 5741 true scaffold_5: 2292553-2298293 Capsella rubella
Carub.0005s0563 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2296294-2298293 Capsella rubella
Carub.0005s0563 2.0kb downstream 2.0kb downstream 5741 true scaffold_5: 2290553-2296293 Capsella rubella
Carub.0005s0563 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2290553-2292552 Capsella rubella
Carub.0005s0563 5.0kb upstream 5.0kb upstream 8741 true scaffold_5: 2292553-2301293 Capsella rubella
Carub.0005s0563 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2296294-2301293 Capsella rubella
Carub.0005s0563 5.0kb downstream 5.0kb downstream 8741 true scaffold_5: 2287553-2296293 Capsella rubella
Carub.0005s0563 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2287553-2292552 Capsella rubella
Carub.0005s0563 10.0kb upstream 10.0kb upstream 13741 true scaffold_5: 2292553-2306293 Capsella rubella
Carub.0005s0563 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2296294-2306293 Capsella rubella
Carub.0005s0563 10.0kb downstream 10.0kb downstream 13741 true scaffold_5: 2282553-2296293 Capsella rubella
Carub.0005s0563 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2282553-2292552 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368189 5261 Brassicaceae View MSA
123840371 5264 Brassicales-Malvales View MSA
124343880 5266 SBM View MSA
124244393 5268 Malvidae View MSA
124069004 5270 Rosid View MSA
123739785 5271 Pentapetalae View MSA
122796988 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain