Gene : Carub.0005s0297 C. rubella v1.1
Defline:  (1 of 2) PTHR33914//PTHR33914:SF2 - FAMILY NOT NAMED // 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  297
Name:  ? Carub.0005s0297 Secondary Identifier:  ? PAC:39226049
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0297 0.5kb upstream 0.5kb upstream 2540 true scaffold_5: 1179477-1182016 Capsella rubella
Carub.0005s0297 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1179477-1179976 Capsella rubella
Carub.0005s0297 0.5kb downstream 0.5kb downstream 2540 true scaffold_5: 1179977-1182516 Capsella rubella
Carub.0005s0297 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1182017-1182516 Capsella rubella
Carub.0005s0297 1.0kb upstream 1.0kb upstream 3040 true scaffold_5: 1178977-1182016 Capsella rubella
Carub.0005s0297 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1178977-1179976 Capsella rubella
Carub.0005s0297 1.0kb downstream 1.0kb downstream 3040 true scaffold_5: 1179977-1183016 Capsella rubella
Carub.0005s0297 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1182017-1183016 Capsella rubella
Carub.0005s0297 2.0kb upstream 2.0kb upstream 4040 true scaffold_5: 1177977-1182016 Capsella rubella
Carub.0005s0297 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1177977-1179976 Capsella rubella
Carub.0005s0297 2.0kb downstream 2.0kb downstream 4040 true scaffold_5: 1179977-1184016 Capsella rubella
Carub.0005s0297 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1182017-1184016 Capsella rubella
Carub.0005s0297 5.0kb upstream 5.0kb upstream 7040 true scaffold_5: 1174977-1182016 Capsella rubella
Carub.0005s0297 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1174977-1179976 Capsella rubella
Carub.0005s0297 5.0kb downstream 5.0kb downstream 7040 true scaffold_5: 1179977-1187016 Capsella rubella
Carub.0005s0297 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1182017-1187016 Capsella rubella
Carub.0005s0297 10.0kb upstream 10.0kb upstream 12040 true scaffold_5: 1169977-1182016 Capsella rubella
Carub.0005s0297 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1169977-1179976 Capsella rubella
Carub.0005s0297 10.0kb downstream 10.0kb downstream 12040 true scaffold_5: 1179977-1192016 Capsella rubella
Carub.0005s0297 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1182017-1192016 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372161 5261 Brassicaceae View MSA
123836320 5264 Brassicales-Malvales View MSA
124336784 5266 SBM View MSA
124253505 5268 Malvidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain