Gene : Carub.0005s0336 C. rubella v1.1
Defline:  (1 of 4) PTHR13691 - RIBOSOMAL PROTEIN L2 Genomic Order:  336
Name:  ? Carub.0005s0336 Secondary Identifier:  ? PAC:39225244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0336 0.5kb upstream 0.5kb upstream 2618 true scaffold_5: 1341947-1344564 Capsella rubella
Carub.0005s0336 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1341947-1342446 Capsella rubella
Carub.0005s0336 0.5kb downstream 0.5kb downstream 2618 true scaffold_5: 1342447-1345064 Capsella rubella
Carub.0005s0336 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1344565-1345064 Capsella rubella
Carub.0005s0336 1.0kb upstream 1.0kb upstream 3118 true scaffold_5: 1341447-1344564 Capsella rubella
Carub.0005s0336 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1341447-1342446 Capsella rubella
Carub.0005s0336 1.0kb downstream 1.0kb downstream 3118 true scaffold_5: 1342447-1345564 Capsella rubella
Carub.0005s0336 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1344565-1345564 Capsella rubella
Carub.0005s0336 2.0kb upstream 2.0kb upstream 4118 true scaffold_5: 1340447-1344564 Capsella rubella
Carub.0005s0336 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1340447-1342446 Capsella rubella
Carub.0005s0336 2.0kb downstream 2.0kb downstream 4118 true scaffold_5: 1342447-1346564 Capsella rubella
Carub.0005s0336 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1344565-1346564 Capsella rubella
Carub.0005s0336 5.0kb upstream 5.0kb upstream 7118 true scaffold_5: 1337447-1344564 Capsella rubella
Carub.0005s0336 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1337447-1342446 Capsella rubella
Carub.0005s0336 5.0kb downstream 5.0kb downstream 7118 true scaffold_5: 1342447-1349564 Capsella rubella
Carub.0005s0336 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1344565-1349564 Capsella rubella
Carub.0005s0336 10.0kb upstream 10.0kb upstream 12118 true scaffold_5: 1332447-1344564 Capsella rubella
Carub.0005s0336 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1332447-1342446 Capsella rubella
Carub.0005s0336 10.0kb downstream 10.0kb downstream 12118 true scaffold_5: 1342447-1354564 Capsella rubella
Carub.0005s0336 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1344565-1354564 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363153 5261 Brassicaceae View MSA
123832685 5264 Brassicales-Malvales View MSA
124340378 5266 SBM View MSA
124236843 5268 Malvidae View MSA
124066286 5270 Rosid View MSA
123753732 5271 Pentapetalae View MSA
122797122 5272 Eudicot View MSA
122049375 5273 Angiosperm View MSA
123428909 5275 Viridiplantae View MSA
121350673 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain