Gene : Carub.0005s0351 C. rubella v1.1
Defline:  (1 of 1) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  351
Name:  ? Carub.0005s0351 Secondary Identifier:  ? PAC:39224879
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0351 0.5kb upstream 0.5kb upstream 5975 true scaffold_5: 1413325-1419299 Capsella rubella
Carub.0005s0351 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1413325-1413824 Capsella rubella
Carub.0005s0351 0.5kb downstream 0.5kb downstream 5975 true scaffold_5: 1413825-1419799 Capsella rubella
Carub.0005s0351 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1419300-1419799 Capsella rubella
Carub.0005s0351 1.0kb upstream 1.0kb upstream 6475 true scaffold_5: 1412825-1419299 Capsella rubella
Carub.0005s0351 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1412825-1413824 Capsella rubella
Carub.0005s0351 1.0kb downstream 1.0kb downstream 6475 true scaffold_5: 1413825-1420299 Capsella rubella
Carub.0005s0351 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1419300-1420299 Capsella rubella
Carub.0005s0351 2.0kb upstream 2.0kb upstream 7475 true scaffold_5: 1411825-1419299 Capsella rubella
Carub.0005s0351 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1411825-1413824 Capsella rubella
Carub.0005s0351 2.0kb downstream 2.0kb downstream 7475 true scaffold_5: 1413825-1421299 Capsella rubella
Carub.0005s0351 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1419300-1421299 Capsella rubella
Carub.0005s0351 5.0kb upstream 5.0kb upstream 10475 true scaffold_5: 1408825-1419299 Capsella rubella
Carub.0005s0351 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1408825-1413824 Capsella rubella
Carub.0005s0351 5.0kb downstream 5.0kb downstream 10475 true scaffold_5: 1413825-1424299 Capsella rubella
Carub.0005s0351 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1419300-1424299 Capsella rubella
Carub.0005s0351 10.0kb upstream 10.0kb upstream 15475 true scaffold_5: 1403825-1419299 Capsella rubella
Carub.0005s0351 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1403825-1413824 Capsella rubella
Carub.0005s0351 10.0kb downstream 10.0kb downstream 15475 true scaffold_5: 1413825-1429299 Capsella rubella
Carub.0005s0351 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1419300-1429299 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363089 5261 Brassicaceae View MSA
123830328 5264 Brassicales-Malvales View MSA
124343939 5266 SBM View MSA
124249766 5268 Malvidae View MSA
124062330 5270 Rosid View MSA
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain