Gene : Carub.0005s0350 C. rubella v1.1
Defline:  (1 of 2) PF00395 - S-layer homology domain (SLH) Genomic Order:  350
Name:  ? Carub.0005s0350 Secondary Identifier:  ? PAC:39224066
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0350 0.5kb upstream 0.5kb upstream 3395 true scaffold_5: 1410252-1413646 Capsella rubella
Carub.0005s0350 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1410252-1410751 Capsella rubella
Carub.0005s0350 0.5kb downstream 0.5kb downstream 3395 true scaffold_5: 1410752-1414146 Capsella rubella
Carub.0005s0350 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1413647-1414146 Capsella rubella
Carub.0005s0350 1.0kb upstream 1.0kb upstream 3895 true scaffold_5: 1409752-1413646 Capsella rubella
Carub.0005s0350 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1409752-1410751 Capsella rubella
Carub.0005s0350 1.0kb downstream 1.0kb downstream 3895 true scaffold_5: 1410752-1414646 Capsella rubella
Carub.0005s0350 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1413647-1414646 Capsella rubella
Carub.0005s0350 2.0kb upstream 2.0kb upstream 4895 true scaffold_5: 1408752-1413646 Capsella rubella
Carub.0005s0350 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1408752-1410751 Capsella rubella
Carub.0005s0350 2.0kb downstream 2.0kb downstream 4895 true scaffold_5: 1410752-1415646 Capsella rubella
Carub.0005s0350 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1413647-1415646 Capsella rubella
Carub.0005s0350 5.0kb upstream 5.0kb upstream 7895 true scaffold_5: 1405752-1413646 Capsella rubella
Carub.0005s0350 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1405752-1410751 Capsella rubella
Carub.0005s0350 5.0kb downstream 5.0kb downstream 7895 true scaffold_5: 1410752-1418646 Capsella rubella
Carub.0005s0350 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1413647-1418646 Capsella rubella
Carub.0005s0350 10.0kb upstream 10.0kb upstream 12895 true scaffold_5: 1400752-1413646 Capsella rubella
Carub.0005s0350 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1400752-1410751 Capsella rubella
Carub.0005s0350 10.0kb downstream 10.0kb downstream 12895 true scaffold_5: 1410752-1423646 Capsella rubella
Carub.0005s0350 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1413647-1423646 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041383 5273 Angiosperm View MSA
122370865 5261 Brassicaceae View MSA
123828970 5264 Brassicales-Malvales View MSA
124339584 5266 SBM View MSA
124237285 5268 Malvidae View MSA
124066424 5270 Rosid View MSA
123737499 5271 Pentapetalae View MSA
122793809 5272 Eudicot View MSA
121350545 5274 Embryophyte View MSA
123381784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain