Gene : Carub.0005s0396 C. rubella v1.1
Defline:  (1 of 1) PTHR10794//PTHR10794:SF52 - ABHYDROLASE DOMAIN-CONTAINING PROTEIN // CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  396
Name:  ? Carub.0005s0396 Secondary Identifier:  ? PAC:39223956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0396 0.5kb upstream 0.5kb upstream 2290 true scaffold_5: 1597511-1599800 Capsella rubella
Carub.0005s0396 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1597511-1598010 Capsella rubella
Carub.0005s0396 0.5kb downstream 0.5kb downstream 2290 true scaffold_5: 1598011-1600300 Capsella rubella
Carub.0005s0396 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1599801-1600300 Capsella rubella
Carub.0005s0396 1.0kb upstream 1.0kb upstream 2790 true scaffold_5: 1597011-1599800 Capsella rubella
Carub.0005s0396 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1597011-1598010 Capsella rubella
Carub.0005s0396 1.0kb downstream 1.0kb downstream 2790 true scaffold_5: 1598011-1600800 Capsella rubella
Carub.0005s0396 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1599801-1600800 Capsella rubella
Carub.0005s0396 2.0kb upstream 2.0kb upstream 3790 true scaffold_5: 1596011-1599800 Capsella rubella
Carub.0005s0396 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1596011-1598010 Capsella rubella
Carub.0005s0396 2.0kb downstream 2.0kb downstream 3790 true scaffold_5: 1598011-1601800 Capsella rubella
Carub.0005s0396 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1599801-1601800 Capsella rubella
Carub.0005s0396 5.0kb upstream 5.0kb upstream 6790 true scaffold_5: 1593011-1599800 Capsella rubella
Carub.0005s0396 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1593011-1598010 Capsella rubella
Carub.0005s0396 5.0kb downstream 5.0kb downstream 6790 true scaffold_5: 1598011-1604800 Capsella rubella
Carub.0005s0396 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1599801-1604800 Capsella rubella
Carub.0005s0396 10.0kb upstream 10.0kb upstream 11790 true scaffold_5: 1588011-1599800 Capsella rubella
Carub.0005s0396 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1588011-1598010 Capsella rubella
Carub.0005s0396 10.0kb downstream 10.0kb downstream 11790 true scaffold_5: 1598011-1609800 Capsella rubella
Carub.0005s0396 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1599801-1609800 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365324 5261 Brassicaceae View MSA
123834958 5264 Brassicales-Malvales View MSA
124338839 5266 SBM View MSA
124240282 5268 Malvidae View MSA
124061963 5270 Rosid View MSA
123742837 5271 Pentapetalae View MSA
122786342 5272 Eudicot View MSA
122044525 5273 Angiosperm View MSA
121344475 5274 Embryophyte View MSA
123426126 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain