Gene : Carub.0005s0702 C. rubella v1.1
Defline:  (1 of 3) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  702
Name:  ? Carub.0005s0702 Secondary Identifier:  ? PAC:39224845
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0702 0.5kb upstream 0.5kb upstream 2243 true scaffold_5: 2965350-2967592 Capsella rubella
Carub.0005s0702 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2967093-2967592 Capsella rubella
Carub.0005s0702 0.5kb downstream 0.5kb downstream 2243 true scaffold_5: 2964850-2967092 Capsella rubella
Carub.0005s0702 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2964850-2965349 Capsella rubella
Carub.0005s0702 1.0kb upstream 1.0kb upstream 2743 true scaffold_5: 2965350-2968092 Capsella rubella
Carub.0005s0702 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2967093-2968092 Capsella rubella
Carub.0005s0702 1.0kb downstream 1.0kb downstream 2743 true scaffold_5: 2964350-2967092 Capsella rubella
Carub.0005s0702 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2964350-2965349 Capsella rubella
Carub.0005s0702 2.0kb upstream 2.0kb upstream 3743 true scaffold_5: 2965350-2969092 Capsella rubella
Carub.0005s0702 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2967093-2969092 Capsella rubella
Carub.0005s0702 2.0kb downstream 2.0kb downstream 3743 true scaffold_5: 2963350-2967092 Capsella rubella
Carub.0005s0702 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2963350-2965349 Capsella rubella
Carub.0005s0702 5.0kb upstream 5.0kb upstream 6743 true scaffold_5: 2965350-2972092 Capsella rubella
Carub.0005s0702 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2967093-2972092 Capsella rubella
Carub.0005s0702 5.0kb downstream 5.0kb downstream 6743 true scaffold_5: 2960350-2967092 Capsella rubella
Carub.0005s0702 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2960350-2965349 Capsella rubella
Carub.0005s0702 10.0kb upstream 10.0kb upstream 11743 true scaffold_5: 2965350-2977092 Capsella rubella
Carub.0005s0702 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2967093-2977092 Capsella rubella
Carub.0005s0702 10.0kb downstream 10.0kb downstream 11743 true scaffold_5: 2955350-2967092 Capsella rubella
Carub.0005s0702 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2955350-2965349 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343487 5261 Brassicaceae View MSA
123783671 5264 Brassicales-Malvales View MSA
124281891 5266 SBM View MSA
124247832 5268 Malvidae View MSA
124068610 5270 Rosid View MSA
123740803 5271 Pentapetalae View MSA
122792927 5272 Eudicot View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain