Gene : Carub.0005s0705 C. rubella v1.1
Defline:  (1 of 6) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  705
Name:  ? Carub.0005s0705 Secondary Identifier:  ? PAC:39224088
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0705 0.5kb upstream 0.5kb upstream 2290 true scaffold_5: 2973394-2975683 Capsella rubella
Carub.0005s0705 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2973394-2973893 Capsella rubella
Carub.0005s0705 0.5kb downstream 0.5kb downstream 2290 true scaffold_5: 2973894-2976183 Capsella rubella
Carub.0005s0705 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2975684-2976183 Capsella rubella
Carub.0005s0705 1.0kb upstream 1.0kb upstream 2790 true scaffold_5: 2972894-2975683 Capsella rubella
Carub.0005s0705 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2972894-2973893 Capsella rubella
Carub.0005s0705 1.0kb downstream 1.0kb downstream 2790 true scaffold_5: 2973894-2976683 Capsella rubella
Carub.0005s0705 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2975684-2976683 Capsella rubella
Carub.0005s0705 2.0kb upstream 2.0kb upstream 3790 true scaffold_5: 2971894-2975683 Capsella rubella
Carub.0005s0705 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2971894-2973893 Capsella rubella
Carub.0005s0705 2.0kb downstream 2.0kb downstream 3790 true scaffold_5: 2973894-2977683 Capsella rubella
Carub.0005s0705 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2975684-2977683 Capsella rubella
Carub.0005s0705 5.0kb upstream 5.0kb upstream 6790 true scaffold_5: 2968894-2975683 Capsella rubella
Carub.0005s0705 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2968894-2973893 Capsella rubella
Carub.0005s0705 5.0kb downstream 5.0kb downstream 6790 true scaffold_5: 2973894-2980683 Capsella rubella
Carub.0005s0705 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2975684-2980683 Capsella rubella
Carub.0005s0705 10.0kb upstream 10.0kb upstream 11790 true scaffold_5: 2963894-2975683 Capsella rubella
Carub.0005s0705 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2963894-2973893 Capsella rubella
Carub.0005s0705 10.0kb downstream 10.0kb downstream 11790 true scaffold_5: 2973894-2985683 Capsella rubella
Carub.0005s0705 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2975684-2985683 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122372726 5261 Brassicaceae View MSA
123838716 5264 Brassicales-Malvales View MSA
124341066 5266 SBM View MSA
124247852 5268 Malvidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain