Gene : Carub.0005s0790 C. rubella v1.1
Defline:  (1 of 1) PTHR15664//PTHR15664:SF3 - C20ORF30 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  790
Name:  ? Carub.0005s0790 Secondary Identifier:  ? PAC:39224222
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0790 0.5kb upstream 0.5kb upstream 2734 true scaffold_5: 3496249-3498982 Capsella rubella
Carub.0005s0790 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3498483-3498982 Capsella rubella
Carub.0005s0790 0.5kb downstream 0.5kb downstream 2734 true scaffold_5: 3495749-3498482 Capsella rubella
Carub.0005s0790 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3495749-3496248 Capsella rubella
Carub.0005s0790 1.0kb upstream 1.0kb upstream 3234 true scaffold_5: 3496249-3499482 Capsella rubella
Carub.0005s0790 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3498483-3499482 Capsella rubella
Carub.0005s0790 1.0kb downstream 1.0kb downstream 3234 true scaffold_5: 3495249-3498482 Capsella rubella
Carub.0005s0790 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3495249-3496248 Capsella rubella
Carub.0005s0790 2.0kb upstream 2.0kb upstream 4234 true scaffold_5: 3496249-3500482 Capsella rubella
Carub.0005s0790 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3498483-3500482 Capsella rubella
Carub.0005s0790 2.0kb downstream 2.0kb downstream 4234 true scaffold_5: 3494249-3498482 Capsella rubella
Carub.0005s0790 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3494249-3496248 Capsella rubella
Carub.0005s0790 5.0kb upstream 5.0kb upstream 7234 true scaffold_5: 3496249-3503482 Capsella rubella
Carub.0005s0790 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3498483-3503482 Capsella rubella
Carub.0005s0790 5.0kb downstream 5.0kb downstream 7234 true scaffold_5: 3491249-3498482 Capsella rubella
Carub.0005s0790 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3491249-3496248 Capsella rubella
Carub.0005s0790 10.0kb upstream 10.0kb upstream 12234 true scaffold_5: 3496249-3508482 Capsella rubella
Carub.0005s0790 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3498483-3508482 Capsella rubella
Carub.0005s0790 10.0kb downstream 10.0kb downstream 12234 true scaffold_5: 3486249-3498482 Capsella rubella
Carub.0005s0790 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3486249-3496248 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369233 5261 Brassicaceae View MSA
123832302 5264 Brassicales-Malvales View MSA
124321792 5266 SBM View MSA
124251033 5268 Malvidae View MSA
124050420 5270 Rosid View MSA
123747758 5271 Pentapetalae View MSA
122788490 5272 Eudicot View MSA
122042918 5273 Angiosperm View MSA
121351470 5274 Embryophyte View MSA
123427818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain